RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CTXN2P0C2S0 81 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 OR13C7P0DN81 318 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 DTYMKP23919 212 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 HLA-DMBP28068 263 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 ADMP35318 185 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 TRAM1Q15629 374 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 Q56UQ5 140 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 ZNF66Q6ZN08 573 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 PACRGLQ8N7B6 248 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 NUDCD2Q8WVJ2 157 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 SECTM1Q8WVN6 248 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 RHPN1-AS1Q9BWJ2 59 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 CCL28Q9NRJ3 127 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 ETV7Q9Y603 341 aa10.79□□□□□ -0.68
HDAC8-213ENST00000436675 C11orf94C9JXX5 98 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 K7EMT4 169 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 SULT1C2O00338 296 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 CHEK1O14757 476 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 RTL8CO15255 209 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 CYB5BO43169 146 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 PTHLHP12272 177 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 RAB6AP20340 208 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 RANBP1P43487 201 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 CMC4P56277 68 aaPredicted RBP10.78□□□□□ -0.68
HDAC8-213ENST00000436675 IRF3Q14653 427 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 LEMD1Q68G75 181 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 CNIH2Q6PI25 160 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 SPSB3Q6PJ21 355 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 Q6ZTC4 211 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 GDPD1Q8N9F7 314 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 TMEM116Q8NCL8 245 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 SCARB1Q8WTV0 552 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 HINT2Q9BX68 163 aa10.78□□□□□ -0.68
HDAC8-213ENST00000436675 QTRT1Q9BXR0 403 aaKnown RBP10.78□□□□□ -0.68
HDAC8-213ENST00000436675 IGHV4-28A0A0C4DH34 117 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 IGHV7-4-1A0A0J9YVY3 117 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 C15orf62A8K5M9 175 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 F8W735 103 aaPredicted RBP10.77□□□□□ -0.69
HDAC8-213ENST00000436675 MRPS14O60783 128 aaKnown RBP10.77□□□□□ -0.69
HDAC8-213ENST00000436675 YIF1AO95070 293 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 SERPINE2P07093 398 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 RBMY1A1P0DJD3 496 aaKnown RBP10.77□□□□□ -0.69
HDAC8-213ENST00000436675 RBMY1CP0DJD4 496 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 WT1-ASQ06250 92 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
HDAC8-213ENST00000436675 SSX1Q16384 188 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 NR2C2APQ86WQ0 139 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 Q8NAQ8 132 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 DMBX1Q8NFW5 382 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 TMEM140Q9NV12 185 aa10.77□□□□□ -0.69
HDAC8-213ENST00000436675 TRAV10A0A0B4J240 114 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 SMIM30A4D0T7 59 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 TMEM235A6NFC5 223 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 IFITM5A6NNB3 132 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 PDCD5O14737 125 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 TRAPPC2P0DI81 140 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 TRAPPC2BP0DI82 140 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 PSMA1P25786 263 aaKnown RBP10.76□□□□□ -0.69
HDAC8-213ENST00000436675 HACD4Q5VWC8 232 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 GIMAP1Q8WWP7 306 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 CMTM3Q96MX0 182 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 AIFM2Q9BRQ8 373 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 C8orf4Q9NR00 106 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 SCN3BQ9NY72 215 aa10.76□□□□□ -0.69
HDAC8-213ENST00000436675 TEX50A0A1B0GTY4 177 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 K7EIM0 57 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 CTSGP08311 255 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 NQO2P16083 231 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 TAS2R31P59538 309 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 DEFB131AP59861 70 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 ZNF773Q6PK81 442 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 ZNF767PQ75MW2 155 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 TCF24Q7RTU0 167 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 ZNF414Q96IQ9 312 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
HDAC8-213ENST00000436675 DCSTAMPQ9H295 470 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 ANXA10Q9UJ72 324 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 HSPG2P98160 4391 aa10.75□□□□□ -0.69
HDAC8-213ENST00000436675 ERICH4A6NGS2 130 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 NUPL2O15504 423 aaKnown RBP10.74□□□□□ -0.69
HDAC8-213ENST00000436675 SSX5O60225 188 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 HPRT1P00492 218 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 FCGR2CP31995 323 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 GNG2P59768 71 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 MLLT11Q13015 90 aaPredicted RBP10.74□□□□□ -0.69
HDAC8-213ENST00000436675 ARL6IP1Q15041 203 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 ZNF575Q86XF7 245 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 CENPSQ8N2Z9 138 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 OR1L8Q8NGR8 309 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 OR13F1Q8NGS4 319 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 OR51H1Q8NH63 302 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 CCDC90BQ9GZT6 254 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 SLC5A7Q9GZV3 580 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 HRH4Q9H3N8 390 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 ACOT13Q9NPJ3 140 aa10.74□□□□□ -0.69
HDAC8-213ENST00000436675 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
HDAC8-213ENST00000436675 ELOA3CA0A087WX78 387 aaPredicted RBP10.73□□□□□ -0.69
HDAC8-213ENST00000436675 TRAV14DV4A0A0A6YYC5 116 aa10.73□□□□□ -0.69
HDAC8-213ENST00000436675 IGHV3-66A0A0C4DH42 116 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms