RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FAM71F2Q6NXP2 309 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 CHD5Q8TDI0 1954 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 TRAV14DV4A0A0A6YYC5 116 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 TMEM95Q3KNT9 176 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 CADP27708 2225 aa9.52□□□□□ -0.89
SCN4A-201ENST00000435607 A0A1W2PPV9 198 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 FOXB2Q5VYV0 432 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 C20orf204Q6ZNR8 217 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 EDA2RQ9HAV5 297 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 GLIPR1P48060 266 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 ZNF831Q5JPB2 1677 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 TGIF2-C20orf24A0A0A6YYL0 155 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 ZNF600Q6ZNG1 722 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 FAM27E3Q08E93 113 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 C3orf36Q3SXR2 165 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 CIARTQ8N365 385 aaPredicted RBP9.51□□□□□ -0.89
SCN4A-201ENST00000435607 GGACTQ9BVM4 153 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 IGHV3-11P01762 117 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 CSRP1P21291 193 aaKnown RBP9.51□□□□□ -0.89
SCN4A-201ENST00000435607 PLNP26678 52 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 SRIP30626 198 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 SLC22A18ASQ8N1D0 253 aa9.51□□□□□ -0.89
SCN4A-201ENST00000435607 A0A1B0GUT8 65 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 TCF21O43680 179 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 AGAP20933 346 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 ATP1A1-AS1Q5TC04 95 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 MORN3Q6PF18 240 aaPredicted RBP9.5□□□□□ -0.89
SCN4A-201ENST00000435607 BIVMQ86UB2 503 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 IGKV3D-20A0A0C4DH25 116 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 NBR2O15453 112 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 THBDP07204 575 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 STRCQ7RTU9 1775 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 FER1L5A0AVI2 2057 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 APOMO95445 188 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 KLK13Q9UKR3 277 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 FER1L6-AS1Q8NA97 138 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 OR5P3Q8WZ94 311 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 ZG16O60844 167 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 ZP1P60852 638 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 SNAI3Q3KNW1 292 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 ACP7Q6ZNF0 438 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 PSMG3Q9BT73 122 aaPredicted RBP9.5□□□□□ -0.89
SCN4A-201ENST00000435607 ALX4Q9H161 411 aaPredicted RBP9.5□□□□□ -0.89
SCN4A-201ENST00000435607 TBL2Q9Y4P3 447 aaKnown RBP9.5□□□□□ -0.89
SCN4A-201ENST00000435607 LINC00312Q9Y6C7 94 aa9.5□□□□□ -0.89
SCN4A-201ENST00000435607 C17orf100A8MU93 164 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 PAX2Q02962 417 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 ZNRF1Q8ND25 227 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 SIGLEC12Q96PQ1 595 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 SDHCQ99643 169 aaPredicted RBP9.49□□□□□ -0.89
SCN4A-201ENST00000435607 FHITP49789 147 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 CFHR5Q9BXR6 569 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 FOXJ2Q9P0K8 574 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 PEBP1P30086 187 aaKnown RBP9.49□□□□□ -0.89
SCN4A-201ENST00000435607 RUNX1Q01196 453 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 NR2C2APQ86WQ0 139 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
SCN4A-201ENST00000435607 THADAQ6YHU6 1953 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 QSER1Q2KHR3 1735 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 H3BTX0 84 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 IFI6P09912 130 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 CDKN1AP38936 164 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 ZAR1Q86SH2 424 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 CACNG8Q8WXS5 425 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 MS4A6AQ9H2W1 248 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 SRD5A1P18405 259 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 RCC1P18754 421 aaPredicted RBP9.49□□□□□ -0.89
SCN4A-201ENST00000435607 IFI27L2Q9H2X8 130 aa9.49□□□□□ -0.89
SCN4A-201ENST00000435607 FABP5P3A8MUU1 101 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 E9PLN8 166 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 IGHV3-48P01763 117 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 LINC00158P58513 81 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 VKORC1Q9BQB6 163 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 MRPL20Q9BYC9 149 aaKnown RBP9.48□□□□□ -0.89
SCN4A-201ENST00000435607 SRSF6Q13247 344 aaKnown RBP9.48□□□□□ -0.89
SCN4A-201ENST00000435607 ANKRD36A6QL64 1941 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 GCHFRP30047 84 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 CENPWQ5EE01 88 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 MSRB3Q8IXL7 192 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 IL11P20809 199 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 TMEM91Q6ZNR0 172 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 ADAMTSL3P82987 1691 aa9.48□□□□□ -0.89
SCN4A-201ENST00000435607 KBTBD11-OT1A0A1B0GTJ5 212 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 LOC390937A0A1W2PQ73 354 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 BMPERQ8N8U9 685 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 SRXN1Q9BYN0 137 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 CRIM1Q9NZV1 1036 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 TMEM50AO95807 157 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 CECR9P0C854 216 aa9.47□□□□□ -0.89
SCN4A-201ENST00000435607 SCN7AQ01118 1682 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms