RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 OR4A5Q8NH83 315 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 OR9G1Q8NH87 305 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 LINC01560Q8TB33 94 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 RPUSD4Q96CM3 377 aaKnown RBP13.61□□□□□ -0.23
LIMK1-203ENST00000435201 FLYWCH2Q96CP2 140 aaKnown RBP13.61□□□□□ -0.23
LIMK1-203ENST00000435201 C1orf159Q96HA4 380 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 PARLQ9H300 379 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 PATZ1Q9HBE1 687 aaKnown RBP13.61□□□□□ -0.23
LIMK1-203ENST00000435201 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 PDE6DO43924 150 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 STAG3L2P0CL84 134 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 STAG3L3P0CL85 134 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 RPL29P47914 159 aaKnown RBP13.61□□□□□ -0.23
LIMK1-203ENST00000435201 B2MP61769 119 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 OR4C13Q8NGP0 309 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 OR1L8Q8NGR8 309 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 VSTM2AQ8TAG5 236 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 NABP2Q9BQ15 211 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 TXNDC17Q9BRA2 123 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 PCGF1Q9BSM1 259 aa13.61□□□□□ -0.23
LIMK1-203ENST00000435201 ARFGEF3Q5TH69 2177 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 UBE2CO00762 179 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 FSTL3O95633 263 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 CXorf1O96002 111 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 PLAUP00749 431 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 CXCL1P09341 107 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 USF1P22415 310 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-203ENST00000435201 IL3RAP26951 378 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 ADIRFQ15847 76 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 BSXQ3C1V8 233 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 MUC15Q8N387 334 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 STPG3Q8N7X2 389 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 ST6GALNAC6Q969X2 333 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 ROS1P08922 2347 aa13.6□□□□□ -0.23
LIMK1-203ENST00000435201 OPN1MWP04001 364 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 OPN1MW2P0DN77 364 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 OPN1MW3P0DN78 364 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 IGHV1-8P0DP01 117 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 RPL8P62917 257 aaKnown RBP13.59□□□□□ -0.23
LIMK1-203ENST00000435201 NANPQ8TBE9 248 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 TMEM167AQ8TBQ9 72 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 SSMEM1Q8WWF3 244 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 METTL1Q9UBP6 276 aaKnown RBP13.59□□□□□ -0.23
LIMK1-203ENST00000435201 WASHC3Q9Y3C0 194 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 INS-IGF2F8WCM5 200 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 REG1BP48304 166 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 RHOBP62745 196 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 TGIF2LXQ8IUE1 241 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 NDUFA4L2Q9NRX3 87 aa13.59□□□□□ -0.23
LIMK1-203ENST00000435201 TGIF2-C20orf24A0A0A6YYL0 155 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 F6UZH7 168 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 TGOLN2O43493 480 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 VENTXO95231 258 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 IGHV2-5P01817 119 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 ARL14EPLP0DKL9 152 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 MC5RP33032 325 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 RPL23P62829 140 aaKnown RBP13.58□□□□□ -0.24
LIMK1-203ENST00000435201 ZNF672Q499Z4 452 aaPredicted RBP13.58□□□□□ -0.24
LIMK1-203ENST00000435201 SPNS3Q6ZMD2 512 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 TMEM144Q7Z5S9 345 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 TNFRSF14Q92956 283 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 TMEM133Q9H2Q1 129 aa13.58□□□□□ -0.24
LIMK1-203ENST00000435201 RALYQ9UKM9 306 aaKnown RBP13.58□□□□□ -0.24
LIMK1-203ENST00000435201 POLEQ07864 2286 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 PKDREJQ9NTG1 2253 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 A0A1W2PN81 502 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 RNASE2P10153 161 aaKnown RBP13.57□□□□□ -0.24
LIMK1-203ENST00000435201 CHRNA7P36544 502 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 ERHP84090 104 aaKnown RBP13.57□□□□□ -0.24
LIMK1-203ENST00000435201 PRR20EP86478 221 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 PRR20CP86479 221 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 PRR20DP86480 221 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 PRR20BP86481 221 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 PRR20AP86496 221 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 AP4M1O00189 453 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 IGFBP2P18065 325 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 PPOXP50336 477 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 CST9LP1Q5W188 147 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 ABHD5Q8WTS1 349 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 FAM210BQ96KR6 192 aa13.57□□□□□ -0.24
LIMK1-203ENST00000435201 TRBV24-1A0A075B6N3 115 aa13.56□□□□□ -0.24
LIMK1-203ENST00000435201 DLL1O00548 723 aa13.56□□□□□ -0.24
LIMK1-203ENST00000435201 SIAH2O43255 324 aa13.56□□□□□ -0.24
LIMK1-203ENST00000435201 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
LIMK1-203ENST00000435201 UBE2G2P60604 165 aa13.56□□□□□ -0.24
LIMK1-203ENST00000435201 DIAPH2-AS1Q14236 149 aa13.56□□□□□ -0.24
LIMK1-203ENST00000435201 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
LIMK1-203ENST00000435201 SLC45A2Q9UMX9 530 aa13.56□□□□□ -0.24
LIMK1-203ENST00000435201 MT-CO2P00403 227 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 S100A8P05109 93 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 ADORA2A-AS1P86434 159 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 FABP9Q0Z7S8 132 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 KIAA0141Q14154 515 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-203ENST00000435201 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 C16orf82Q7Z2V1 217 aa13.55□□□□□ -0.24
LIMK1-203ENST00000435201 C11orf42Q8N5U0 333 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms