RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	ZNF833P	Q6ZTB9	187 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SNRNP40	Q96DI7	357 aa	Known RBP	13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SLC35D1	Q9NTN3	355 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	BET1L	Q9NYM9	111 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SLC45A2	Q9UMX9	530 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	XKRY2	A2RUG3	117 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145		J3QR06	171 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	IGKV1-16	P04430	117 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	IRF2	P14316	349 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	IGFBP2	P18065	325 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	FAM78B	Q5VT40	261 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	LURAP1L	Q8IV03	231 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR5T1	Q8NG75	326 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SFRP2	Q96HF1	295 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	PLEKHA3	Q9HB20	300 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	ARL2-SNX15	V9GYD0	113 aa		13.13	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TRBV23-1	A0A0A0MS06	115 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	DVL1	O14640	695 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	MEF2C	Q06413	473 aa	Predicted RBP	13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TMEM108	Q6UXF1	575 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR5R1	Q8NH85	324 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	FUT9	Q9Y231	359 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	ZFHX4	Q86UP3	3567 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	PGPEP1L	A6NFU8	196 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	AREG	P15514	252 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	ADIPOQ	Q15848	244 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	C2orf83	Q53S99	150 aa		13.12	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	CNOT1	A5YKK6	2376 aa	Known RBP	13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	CFAP47	Q6ZTR5	3102 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	NBEA	Q8NFP9	2946 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145		A0A0G2JNJ9	132 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TEX50	A0A1B0GTY4	177 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	NKX6-3	A6NJ46	265 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TNFRSF1A	P19438	455 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	JOSD1	Q15040	202 aa	Predicted RBP	13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR5B3	Q8NH48	314 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	FKBP11	Q9NYL4	201 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	ELOVL5	Q9NYP7	299 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	ZNRD1	Q9P1U0	126 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145		Q9UFV3	132 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	LY96	Q9Y6Y9	160 aa		13.11	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	DYSF	O75923	2080 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	PLCE1	Q9P212	2302 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	DPRX	A6NFQ7	191 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	C17orf100	A8MU93	164 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	FOXH1	O75593	365 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	FCN3	O75636	299 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	MT-CO2	P00403	227 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TDGF1P3	P51864	188 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	GAMT	Q14353	236 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TEX38	Q6PEX7	206 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	DOLPP1	Q86YN1	238 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR1L8	Q8NGR8	309 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OCC1	Q8TAD7	63 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	HINT2	Q9BX68	163 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	GAL3ST2	Q9H3Q3	398 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	IGKV1OR2-108	A0A075B7D4	117 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	MDFIC2	A0A1B0GVS7	189 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145		C9JCJ5	164 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	C16orf97	H3BN30	126 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SAA1	P0DJI8	122 aa	Predicted RBP	13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	RPL31	P62899	125 aa	Known RBP	13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	CCL8	P80075	99 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	PNKD	Q8N490	385 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OSR1	Q8TAX0	266 aa	Predicted RBP	13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TMEM37	Q8WXS4	190 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SLC35E1	Q96K37	410 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TP53TG5	Q9Y2B4	290 aa		13.1	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	INS-IGF2	F8WCM5	200 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	KLK10	O43240	276 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	GATC	O43716	136 aa	Known RBP	13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	RD3L	P0DJH9	198 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	RNASE2	P10153	161 aa	Known RBP	13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	NDUFB7	P17568	137 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	COL8A2	P25067	703 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TCF15	Q12870	199 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	C9orf152	Q5JTZ5	239 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	MIR17HG	Q75NE6	70 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR5AN1	Q8NGI8	311 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR4P4	Q8NGL7	312 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	SGMS2	Q8NHU3	365 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	JKAMP	Q9P055	326 aa		13.09	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TNFRSF13B	O14836	293 aa	Predicted RBP	13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	THBD	P07204	575 aa		13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR4A8	P0C604	315 aa		13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	PRSS8	Q16651	343 aa		13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TMEM177	Q53S58	311 aa		13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	MOB3B	Q86TA1	216 aa		13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	OR10G8	Q8NGN5	311 aa		13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	NABP2	Q9BQ15	211 aa		13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	MRPL20	Q9BYC9	149 aa	Known RBP	13.08	□□□□□ -0.31
HLA-DQB2-231	ENST00000435145	TRAV9-1	A0A075B6T8	112 aa		13.08	□□□□□ -0.32
HLA-DQB2-231	ENST00000435145		A0A0U1RQK1	487 aa		13.08	□□□□□ -0.32
HLA-DQB2-231	ENST00000435145	ZNF320	A2RRD8	509 aa		13.08	□□□□□ -0.32
HLA-DQB2-231	ENST00000435145		H0YJW9	148 aa		13.08	□□□□□ -0.32
HLA-DQB2-231	ENST00000435145	GZMB	P10144	247 aa		13.08	□□□□□ -0.32
HLA-DQB2-231	ENST00000435145	PAX1	P15863	534 aa		13.08	□□□□□ -0.32
HLA-DQB2-231	ENST00000435145	ZNF596	Q8TC21	504 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms