RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SRPXP78539 464 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 THOC7Q6I9Y2 204 aaKnown RBP12.07□□□□□ -0.48
TREX1-201ENST00000433541 TTC9CQ8N5M4 171 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 OR11H1Q8NG94 326 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 OR10W1Q8NGF6 305 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 OR5B3Q8NH48 314 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 GLYATL2Q8WU03 294 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 LSM10Q969L4 123 aaKnown RBP12.07□□□□□ -0.48
TREX1-201ENST00000433541 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
TREX1-201ENST00000433541 ANKRD34BA5PLL1 514 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 NPIPB5A8MRT5 1133 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 NDUFB6O95139 128 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 CDS2O95674 445 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 FGF2P09038 288 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
TREX1-201ENST00000433541 OR13C7P0DN81 318 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 PSMB6P28072 239 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 RHOGP84095 191 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 C19orf35Q6ZS72 473 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
TREX1-201ENST00000433541 LGI3Q8N145 548 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 MYOZ3Q8TDC0 251 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 ALX4Q9H161 411 aaPredicted RBP12.06□□□□□ -0.48
TREX1-201ENST00000433541 ENY2Q9NPA8 101 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 TMEM14BQ9NUH8 114 aa12.06□□□□□ -0.48
TREX1-201ENST00000433541 PIGBOS1A0A0B4J2F0 54 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 A0A1B0GW64 132 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 FAM223BA6NKX1 122 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 OR2J3O76001 311 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 ATP5G2Q06055 141 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 ZNF616Q08AN1 781 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 TMEM187Q14656 261 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 SPINK9Q5DT21 86 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 MZT2BQ6NZ67 158 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 HSD17B13Q7Z5P4 300 aaPredicted RBP12.05□□□□□ -0.48
TREX1-201ENST00000433541 FAM219AQ8IW50 185 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 FAM223AQ8IWN6 122 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 CADM3Q8N126 398 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 OR1N2Q8NGR9 330 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 LHFPL5Q8TAF8 219 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 SRSF8Q9BRL6 282 aaKnown RBP12.05□□□□□ -0.48
TREX1-201ENST00000433541 PLEKHA3Q9HB20 300 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 FLVCR2Q9UPI3 526 aa12.05□□□□□ -0.48
TREX1-201ENST00000433541 IGLC7A0M8Q6 106 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 CGB1A6NKQ9 187 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 DBX1A6NMT0 343 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 I3L521 148 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 HLA-AP01891 365 aaKnown RBP12.04□□□□□ -0.48
TREX1-201ENST00000433541 OR8U8P0C7N1 319 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
TREX1-201ENST00000433541 HOXA1P49639 335 aaPredicted RBP12.04□□□□□ -0.48
TREX1-201ENST00000433541 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
TREX1-201ENST00000433541 PPP1R1AQ13522 171 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 EXOSC2Q13868 293 aaKnown RBP12.04□□□□□ -0.48
TREX1-201ENST00000433541 KIAA0141Q14154 515 aaPredicted RBP12.04□□□□□ -0.48
TREX1-201ENST00000433541 C4orf46Q504U0 113 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 NECAP1Q8NC96 275 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 IL22RA2Q969J5 263 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 NDUFA4L2Q9NRX3 87 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 FBXL7Q9UJT9 491 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 TRRAPQ9Y4A5 3859 aa12.04□□□□□ -0.48
TREX1-201ENST00000433541 MGAM2Q2M2H8 2515 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 A0A0G2JRQ6 117 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 FAM240BA0A1B0GVZ2 78 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 LINC01619G3V211 115 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 PLA2G10O15496 165 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 NXPH3O95157 252 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 CTRB1P17538 263 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 BTCP35070 178 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 HSPE1P61604 102 aaKnown RBP12.03□□□□□ -0.48
TREX1-201ENST00000433541 C15orf32Q32M92 178 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 CTRB2Q6GPI1 263 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 SLC25A24Q6NUK1 477 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 C20orf85Q9H1P6 137 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.03□□□□□ -0.48
TREX1-201ENST00000433541 THYN1Q9P016 225 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 CACNG5Q9UF02 275 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 TMEM56-RWDD3S4R434 201 aa12.03□□□□□ -0.48
TREX1-201ENST00000433541 TRAV6A0A075B6T7 132 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 IGHV4OR15-8A0A075B7B6 117 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 A0A087WW49 117 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 A0A0B4J2A0 478 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 UPK1BO75841 260 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 SFT2D2O95562 160 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 CRYGCP07315 174 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 UBE2MP61081 183 aaKnown RBP12.02□□□□□ -0.49
TREX1-201ENST00000433541 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.49
TREX1-201ENST00000433541 PRCDQ00LT1 54 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 RUNX1Q01196 453 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 WT1-ASQ06250 92 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 LYZL2Q7Z4W2 148 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 C1QL4Q86Z23 238 aa12.02□□□□□ -0.49
TREX1-201ENST00000433541 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms