RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ZDHHC16Q969W1 377 aa14.56□□□□□ -0.08
HMGN1-206ENST00000431390 CLCC1Q96S66 551 aa14.56□□□□□ -0.08
HMGN1-206ENST00000431390 TPSG1Q9NRR2 321 aa14.56□□□□□ -0.08
HMGN1-206ENST00000431390 PSENENQ9NZ42 101 aa14.56□□□□□ -0.08
HMGN1-206ENST00000431390 TNCP24821 2201 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 TEX50A0A1B0GTY4 177 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 CD5LO43866 347 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 TMEM252Q8N6L7 170 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 TMEM158Q8WZ71 300 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 FBXL15Q9H469 300 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 ZC4H2Q9NQZ6 224 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 C1RLQ9NZP8 487 aa14.55□□□□□ -0.08
HMGN1-206ENST00000431390 FAM24AA6NFZ4 105 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 VDAC2P45880 294 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-206ENST00000431390 HOXA1P49639 335 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-206ENST00000431390 EWSR1Q01844 656 aaKnown RBP eCLIP14.54□□□□□ -0.08
HMGN1-206ENST00000431390 BAXQ07812 192 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 OPCMLQ14982 345 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 PLGLAQ15195 96 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 LRRC75BQ2VPJ9 315 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 FBLN7Q53RD9 439 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 SPINK9Q5DT21 86 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 HIPK2Q9H2X6 1198 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 ENY2Q9NPA8 101 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 NDUFA4L2Q9NRX3 87 aa14.54□□□□□ -0.08
HMGN1-206ENST00000431390 KANTRA0A1W2PQU2 76 aa14.53□□□□□ -0.08
HMGN1-206ENST00000431390 IGSF23A1L1A6 192 aa14.53□□□□□ -0.08
HMGN1-206ENST00000431390 BCL2L11O43521 198 aa14.53□□□□□ -0.08
HMGN1-206ENST00000431390 ACTL6BO94805 426 aa14.53□□□□□ -0.08
HMGN1-206ENST00000431390 MYOD1P15172 320 aa14.53□□□□□ -0.08
HMGN1-206ENST00000431390 C5orf64Q2M2E5 130 aa14.53□□□□□ -0.08
HMGN1-206ENST00000431390 PLEKHA3Q9HB20 300 aa14.53□□□□□ -0.08
HMGN1-206ENST00000431390 INS-IGF2F8WCM5 200 aa14.52□□□□□ -0.08
HMGN1-206ENST00000431390 H3BP45 60 aa14.52□□□□□ -0.08
HMGN1-206ENST00000431390 RPP30P78346 268 aaKnown RBP14.52□□□□□ -0.08
HMGN1-206ENST00000431390 PJVKQ0ZLH3 352 aa14.52□□□□□ -0.08
HMGN1-206ENST00000431390 PIFOQ8TCI5 191 aa14.52□□□□□ -0.08
HMGN1-206ENST00000431390 SSX3Q99909 188 aa14.52□□□□□ -0.08
HMGN1-206ENST00000431390 ARPC5LQ9BPX5 153 aa14.52□□□□□ -0.08
HMGN1-206ENST00000431390 HEYLQ9NQ87 328 aaPredicted RBP14.52□□□□□ -0.08
HMGN1-206ENST00000431390 SOX21Q9Y651 276 aaPredicted RBP14.52□□□□□ -0.08
HMGN1-206ENST00000431390 A0A1W2PN81 502 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 NCBP2LA6PVI3 153 aaKnown RBP14.51□□□□□ -0.09
HMGN1-206ENST00000431390 TAAR5O14804 337 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 CHRNA7P36544 502 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 COMPP49747 757 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-206ENST00000431390 SPANXN5Q5MJ07 72 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 TMEM14EPQ6UXP3 125 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 STX12Q86Y82 276 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 GON7Q9BXV9 100 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 STRAPQ9Y3F4 350 aaKnown RBP14.51□□□□□ -0.09
HMGN1-206ENST00000431390 SCAF4O95104 1147 aaKnown RBP14.51□□□□□ -0.09
HMGN1-206ENST00000431390 OPN1MWP04001 364 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 OPN1MW2P0DN77 364 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 OPN1MW3P0DN78 364 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 RPL27AP46776 148 aaKnown RBP14.51□□□□□ -0.09
HMGN1-206ENST00000431390 SULT1A1P50225 295 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 TNXAQ16473 311 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 HINT2Q9BX68 163 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 U3KQ87 197 aa14.51□□□□□ -0.09
HMGN1-206ENST00000431390 CGB1A6NKQ9 187 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 CA2P00918 260 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 NHLH2Q02577 135 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 C10orf55Q5SWW7 151 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 SLC51BQ86UW2 128 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 MRPL41Q8IXM3 137 aaKnown RBP14.5□□□□□ -0.09
HMGN1-206ENST00000431390 STPG2Q8N412 459 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 Q8N9W7 124 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 RBM14Q96PK6 669 aaKnown RBP14.5□□□□□ -0.09
HMGN1-206ENST00000431390 OR4C12Q96R67 309 aa14.5□□□□□ -0.09
HMGN1-206ENST00000431390 FCN1O00602 326 aa14.49□□□□□ -0.09
HMGN1-206ENST00000431390 ATP5IP56385 69 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-206ENST00000431390 DEFB112Q30KQ8 113 aa14.49□□□□□ -0.09
HMGN1-206ENST00000431390 BCL6BQ8N143 479 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-206ENST00000431390 SLA2Q9H6Q3 261 aa14.49□□□□□ -0.09
HMGN1-206ENST00000431390 FBXL17Q9UF56 701 aa14.49□□□□□ -0.09
HMGN1-206ENST00000431390 E7EUB6 86 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 H3BUX3 64 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 CST7O76096 145 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 IFNA10P01566 189 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 METTL15P1P0C7V9 234 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 HTR2BP41595 481 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 SSBP2P81877 361 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-206ENST00000431390 ERHP84090 104 aaKnown RBP14.48□□□□□ -0.09
HMGN1-206ENST00000431390 TMEM267Q0VDI3 215 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-206ENST00000431390 SLC24A4Q8NFF2 622 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 SRSF8Q9BRL6 282 aaKnown RBP14.48□□□□□ -0.09
HMGN1-206ENST00000431390 SLC25A33Q9BSK2 321 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 PITPNC1Q9UKF7 332 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 MOB4Q9Y3A3 225 aa14.48□□□□□ -0.09
HMGN1-206ENST00000431390 A0A1B0GW64 132 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 A6NDX4 124 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 C15orf62A8K5M9 175 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 FGF16O43320 207 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 HLA-DRB1P01911 266 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 GNB1P62873 340 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 HBG1P69891 147 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 HBG2P69892 147 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 BSXQ3C1V8 233 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 ZNF562Q6V9R5 426 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms