RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 ZNF114Q8NC26 417 aa9.31□□□□□ -0.92
USP4-205ENST00000431357 ZNRF1Q8ND25 227 aa9.31□□□□□ -0.92
USP4-205ENST00000431357 SLC25A10Q9UBX3 287 aaPredicted RBP9.31□□□□□ -0.92
USP4-205ENST00000431357 DOCK11Q5JSL3 2073 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 TRGV10A0A0A0MS01 117 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 SCO2A0A1W2PP80 73 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 MBD3L4A6NDZ8 208 aaPredicted RBP9.3□□□□□ -0.92
USP4-205ENST00000431357 MBD3L3A6NE82 208 aaPredicted RBP9.3□□□□□ -0.92
USP4-205ENST00000431357 MBD3L5A6NJ08 208 aaPredicted RBP9.3□□□□□ -0.92
USP4-205ENST00000431357 C17orf58Q2M2W7 97 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 CT45A1Q5HYN5 189 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 TIMM23BQ5SRD1 257 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 C1orf194Q5T5A4 169 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 OR4A47Q6IF82 309 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 TEX38Q6PEX7 206 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 MOGAT3Q86VF5 341 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 STPG3Q8N7X2 389 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 CT45A3Q8NHU0 189 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 MBD3L2Q8NHZ7 208 aaPredicted RBP9.3□□□□□ -0.92
USP4-205ENST00000431357 OCC1Q8TAD7 63 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 FAM222BQ8WU58 562 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 C1orf159Q96HA4 380 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 IL36BQ9NZH7 164 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 DKK4Q9UBT3 224 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 PRNDQ9UKY0 176 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 KNTC1P50748 2209 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 CACNA1DQ01668 2161 aa9.3□□□□□ -0.92
USP4-205ENST00000431357 TRBV20OR9-2A0A075B6H5 130 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 NKX6-3A6NJ46 265 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 BMP5P22003 454 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 GATA4P43694 442 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 SELENOTP62341 195 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 MSMPQ1L6U9 139 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 LRP11Q86VZ4 500 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 SSMEM1Q8WWF3 244 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 LPAR2Q9HBW0 351 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 AURKAIP1Q9NWT8 199 aaPredicted RBP9.29□□□□□ -0.92
USP4-205ENST00000431357 YTHDF2Q9Y5A9 579 aaKnown RBP9.29□□□□□ -0.92
USP4-205ENST00000431357 DIDO1Q9BTC0 2240 aaKnown RBP9.29□□□□□ -0.92
USP4-205ENST00000431357 SAA2-SAA4A0A096LPE2 208 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 KIR2DL5BA0A0G2JN68 375 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 KIR2DL5BA0A0G2JPC4 375 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 C20orf202A1L168 122 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 TCF21O43680 179 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 CA2P00918 260 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 SAA2P0DJI9 122 aaPredicted RBP9.29□□□□□ -0.92
USP4-205ENST00000431357 ZNF83P51522 516 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 PRR20EP86478 221 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 PRR20CP86479 221 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 PRR20DP86480 221 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 PRR20BP86481 221 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 PRR20AP86496 221 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 KIR2DL5AQ8N109 375 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 OR2D3Q8NGH3 330 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 RNASE8Q8TDE3 154 aaKnown RBP9.29□□□□□ -0.92
USP4-205ENST00000431357 NEUROG1Q92886 237 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 TMEM167BQ9NRX6 74 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 IDI2-AS1Q9NZ38 188 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 RNF7Q9UBF6 113 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 ZNF257Q9Y2Q1 563 aa9.29□□□□□ -0.92
USP4-205ENST00000431357 IGLV3-9A0A075B6K5 115 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 PGPEP1LA6NFU8 196 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 M0R1B8 84 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 RPL31P62899 125 aaKnown RBP9.28□□□□□ -0.92
USP4-205ENST00000431357 RPL19P84098 196 aaKnown RBP9.28□□□□□ -0.92
USP4-205ENST00000431357 ZNF90Q03938 601 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 COL5A1-AS1Q5SY13 56 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 ITLN1Q8WWA0 313 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 SLC35E1Q96K37 410 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 C19orf24Q9BVV8 132 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 FKBP11Q9NYL4 201 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 SLC45A2Q9UMX9 530 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 OR51B2Q9Y5P1 312 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 TM4SF5O14894 197 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 SPRY3O43610 288 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 IGHV3-7P01780 117 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 SELENOVP59797 346 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 PAFAH1B2P68402 229 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 C1orf229Q6ZS94 237 aaPredicted RBP9.28□□□□□ -0.92
USP4-205ENST00000431357 ZNF439Q8NDP4 499 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 LINC00574Q9H8X3 128 aa9.28□□□□□ -0.92
USP4-205ENST00000431357 BRS3P32247 399 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 ADMP35318 185 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 PRCDQ00LT1 54 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 PRSS8Q16651 343 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 RTL8BQ17RB0 113 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 PIP4P1Q86T03 277 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 LYG1Q8N1E2 194 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 PNKDQ8N490 385 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 OR4P4Q8NGL7 312 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 PLEKHA3Q9HB20 300 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 DNAJC4Q9NNZ3 241 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 CACNA1GO43497 2377 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 HCFC1P51610 2035 aa9.27□□□□□ -0.93
USP4-205ENST00000431357 TRBV9A0A0B4J1U6 114 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 J3QR06 171 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 UPK2O00526 184 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 LINC00869P0C866 280 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 IGFBP2P18065 325 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms