RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PRR20EP86478 221 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PRR20CP86479 221 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PRR20DP86480 221 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PRR20BP86481 221 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PRR20AP86496 221 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 C2orf83Q53S99 150 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 ZNF343Q6P1L6 599 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 ENY2Q9NPA8 101 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 NDUFA4L2Q9NRX3 87 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 NAT8Q9UHE5 227 aa11.33□□□□□ -0.6
HOXC4-202ENST00000430889 TRBV23-1A0A0A0MS06 115 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 CCL21O00585 134 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 PAGE4O60829 102 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 IGLV2-23P01705 113 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 IGHV1-8P0DP01 117 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 RNASE2P10153 161 aaKnown RBP11.32□□□□□ -0.6
HOXC4-202ENST00000430889 NPPCP23582 126 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 RPL29P47914 159 aaKnown RBP11.32□□□□□ -0.6
HOXC4-202ENST00000430889 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
HOXC4-202ENST00000430889 OR1L8Q8NGR8 309 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 TMEM167AQ8TBQ9 72 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 PCGF1Q9BSM1 259 aa11.32□□□□□ -0.6
HOXC4-202ENST00000430889 UBE2CO00762 179 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 IGHV2-70P01814 119 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 LINC00869P0C866 280 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 TEPPQ6URK8 271 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 OR4A5Q8NH83 315 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 NEIL1Q96FI4 390 aaPredicted RBP11.31□□□□□ -0.6
HOXC4-202ENST00000430889 SMIM7Q9BQ49 75 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 PARLQ9H300 379 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
HOXC4-202ENST00000430889 PRELID1Q9Y255 219 aa11.31□□□□□ -0.6
HOXC4-202ENST00000430889 CGB1A6NKQ9 187 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 COL8A2P25067 703 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 PPOXP50336 477 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 B2MP61769 119 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 MRGPRG-AS1Q2M3A8 158 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 MUC15Q8N387 334 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 OR10X1Q8NGY0 326 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 IGFBP2P18065 325 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 REG1BP48304 166 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 SNRPEP62304 92 aaKnown RBP11.3□□□□□ -0.6
HOXC4-202ENST00000430889 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
HOXC4-202ENST00000430889 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 OR4C13Q8NGP0 309 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 OR4F5Q8NH21 305 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
HOXC4-202ENST00000430889 OR4F4Q96R69 305 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 SSX3Q99909 188 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 TMEM133Q9H2Q1 129 aa11.3□□□□□ -0.6
HOXC4-202ENST00000430889 METTL1Q9UBP6 276 aaKnown RBP11.3□□□□□ -0.6
HOXC4-202ENST00000430889 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 TGIF2-C20orf24A0A0A6YYL0 155 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 A0A1W2PPV4 95 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 E7EUB6 86 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 CLDN34H7C241 214 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 IGLV1-47P01700 117 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 USF1P22415 310 aaPredicted RBP11.29□□□□□ -0.6
HOXC4-202ENST00000430889 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
HOXC4-202ENST00000430889 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 C8orf46Q8TAG6 207 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 ABHD5Q8WTS1 349 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 TNFRSF14Q92956 283 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 RPUSD4Q96CM3 377 aaKnown RBP11.29□□□□□ -0.6
HOXC4-202ENST00000430889 HINT2Q9BX68 163 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 IGF2RP11717 2491 aa11.29□□□□□ -0.6
HOXC4-202ENST00000430889 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 CXorf1O96002 111 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 OPN1MWP04001 364 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 OPN1MW2P0DN77 364 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 OPN1MW3P0DN78 364 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 TXNDC17Q9BRA2 123 aa11.28□□□□□ -0.6
HOXC4-202ENST00000430889 RALYQ9UKM9 306 aaKnown RBP11.28□□□□□ -0.6
HOXC4-202ENST00000430889 TRBV24-1A0A075B6N3 115 aa11.27□□□□□ -0.6
HOXC4-202ENST00000430889 PDE6DO43924 150 aa11.27□□□□□ -0.6
HOXC4-202ENST00000430889 VENTXO95231 258 aa11.27□□□□□ -0.6
HOXC4-202ENST00000430889 RBP4P02753 201 aa11.27□□□□□ -0.6
HOXC4-202ENST00000430889 ATP5G3P48201 142 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms