RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 APELAP0DMC3 54 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 SRSF4Q08170 494 aaKnown RBP9.66□□□□□ -0.86
PTCH1-208ENST00000430669 TMEM97Q5BJF2 176 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 OR10D4PQ8NGN7 298 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 OR10J6PQ8NGY7 276 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 PLPPR1Q8TBJ4 325 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 GPR82Q96P67 336 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 MOSP00540 346 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 PRNTQ86SH4 94 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 GPHA2Q96T91 129 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 UTRNP46939 3433 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 TNRC6BQ9UPQ9 1833 aaKnown RBP9.65□□□□□ -0.86
PTCH1-208ENST00000430669 DYNLRB2Q8TF09 96 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 FOXA2Q9Y261 457 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-208ENST00000430669 SLC31A2O15432 143 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 PMCHP20382 165 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 CDC42EP3Q9UKI2 254 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 C17orf98A8MV24 154 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 C2orf68Q2NKX9 166 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 ISOC2Q96AB3 205 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 ZNF257Q9Y2Q1 563 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 DNAH12Q6ZR08 3092 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 TRAV9-1A0A075B6T8 112 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 DUTP33316 252 aaKnown RBP9.65□□□□□ -0.86
PTCH1-208ENST00000430669 HCP5Q6MZN7 132 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 BET1LQ9NYM9 111 aa9.65□□□□□ -0.86
PTCH1-208ENST00000430669 MUC6Q6W4X9 2439 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 TEX50A0A1B0GTY4 177 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 A0A1W2PRD5 423 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 A0A1W2PRF3 423 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 A0A1W2PRM7 423 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 DSCR9P59020 149 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 FXYD3Q14802 87 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 RCC1LQ96I51 464 aaKnown RBP9.65□□□□□ -0.87
PTCH1-208ENST00000430669 C16orf92Q96LL3 132 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 NAGKQ9UJ70 344 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 PROB1E7EW31 1015 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 M0R2Z0 102 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 ZNHIT1O43257 154 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 SMAGPQ0VAQ4 97 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 ARFGEF3Q5TH69 2177 aa9.65□□□□□ -0.87
PTCH1-208ENST00000430669 C1QL1O75973 258 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 IGHV1-46P01743 117 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 NABP2Q9BQ15 211 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 A0A0G2JNJ9 132 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 Q9UFV3 132 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 MSRB2Q9Y3D2 182 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 NACAE9PAV3 2078 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 RAMP3O60896 148 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 CAMPP49913 170 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 PLAURQ03405 335 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 PROK2Q9HC23 129 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 RND2P52198 227 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 WDFY1Q8IWB7 410 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 PARD6AQ9NPB6 346 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 GUCA2BQ16661 112 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 COLCA1Q6ZS62 124 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 SPTAN1Q13813 2472 aaKnown RBP9.64□□□□□ -0.87
PTCH1-208ENST00000430669 IGKV1-12A0A0C4DH73 117 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 ITGB1BP1O14713 200 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 IGKV1D-12P01611 117 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 AMY1AP04745 511 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 LYL1P12980 280 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 UNQ5815/PRO19632Q6UWF5 114 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 C20orf204Q6ZNR8 217 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 GOLT1BQ9Y3E0 138 aa9.64□□□□□ -0.87
PTCH1-208ENST00000430669 SNURFLB1AK76 121 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 HOXA4Q00056 320 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-208ENST00000430669 PACRGQ96M98 296 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-208ENST00000430669 FUT9Q9Y231 359 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 A0A0G2JLM5 398 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 CA2P00918 260 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 AMTP48728 403 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 ARPC1AQ92747 370 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 LOXL3P58215 753 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 PARLQ9H300 379 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 ZNF273Q14593 569 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 FAM216BQ8N7L0 139 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 TEX45Q8NA69 505 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 OR2D3Q8NGH3 330 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 GAMTQ14353 236 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 ZNF343Q6P1L6 599 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 Q6P435 159 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 LINC00305Q7Z4B0 112 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 KLHDC3Q9BQ90 382 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 IGKV1D-13A0A0B4J2D9 117 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 IGKV1-13P0DP09 117 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 BIVMQ86UB2 503 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 TLNRD1Q9H1K6 362 aa9.63□□□□□ -0.87
PTCH1-208ENST00000430669 IGHV3-72A0A0B4J1Y9 119 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 UPK2O00526 184 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 AGAP20933 346 aa9.62□□□□□ -0.87
PTCH1-208ENST00000430669 GCHFRP30047 84 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms