RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 OR4E1P0C645 316 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 SLC25A6P12236 298 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 VAMP1P23763 118 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 RPL23AP62750 156 aaKnown RBP11.67□□□□□ -0.54
GARNL3-204ENST00000429629 C2orf68Q2NKX9 166 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 PDLIM3Q53GG5 364 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-204ENST00000429629 MRPL41Q8IXM3 137 aaKnown RBP11.67□□□□□ -0.54
GARNL3-204ENST00000429629 C20orf85Q9H1P6 137 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 TMED3Q9Y3Q3 217 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 A0A0G2JLM5 398 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 CGB1A6NKQ9 187 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 CTRB1P17538 263 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 PSMB6P28072 239 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 RUNX1Q01196 453 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 DHRS2Q13268 280 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 C10orf55Q5SWW7 151 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 CTRB2Q6GPI1 263 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 LYG2Q86SG7 212 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
GARNL3-204ENST00000429629 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 A0A1B0GU03 582 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 IL5P05113 134 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 RPLP1P05386 114 aaKnown RBP11.65□□□□□ -0.54
GARNL3-204ENST00000429629 H2AFB2P0C5Z0 115 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 PF4V1P10720 104 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 HIST1H1BP16401 226 aaKnown RBP11.65□□□□□ -0.54
GARNL3-204ENST00000429629 PRCDQ00LT1 54 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 ANKRD55Q3KP44 614 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 FAM209BQ5JX69 171 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 PRR31Q5SQ13 230 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 Q6ZRM9 215 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 LYZL2Q7Z4W2 148 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 C11orf44Q8N8P7 122 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 OR5T1Q8NG75 326 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 OR4F17Q8NGA8 305 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 COQ8AQ8NI60 647 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 RNASE11Q8TAA1 199 aaKnown RBP11.65□□□□□ -0.54
GARNL3-204ENST00000429629 ENKURQ8TC29 256 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 MITD1Q8WV92 249 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 GPR146Q96CH1 333 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.54
GARNL3-204ENST00000429629 OR4F4Q96R69 305 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 NUDT15Q9NV35 164 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 NSG2Q9Y328 171 aa11.65□□□□□ -0.54
GARNL3-204ENST00000429629 A0A0G2JRQ6 117 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 HMX3A6NHT5 357 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 DBX1A6NMT0 343 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 CYB5BO43169 146 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 HLA-AP01891 365 aaKnown RBP11.64□□□□□ -0.55
GARNL3-204ENST00000429629 ANXA7P20073 488 aaKnown RBP11.64□□□□□ -0.55
GARNL3-204ENST00000429629 SPCS3P61009 180 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 C4orf46Q504U0 113 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 NRARPQ7Z6K4 114 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 MARVELD1Q9BSK0 173 aa11.64□□□□□ -0.55
GARNL3-204ENST00000429629 FAM223BA6NKX1 122 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
GARNL3-204ENST00000429629 SULT1A3P0DMM9 295 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 SULT1A4P0DMN0 295 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 MYOD1P15172 320 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 SMCO1Q147U7 214 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 PLET1Q6UQ28 207 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 FAM223AQ8IWN6 122 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 NECAP1Q8NC96 275 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 CASTOR1Q8WTX7 329 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 C4orf3Q8WVX3 66 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 PDCD10Q9BUL8 212 aa11.63□□□□□ -0.55
GARNL3-204ENST00000429629 TNCP24821 2201 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 I3L521 148 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 PRAF2O60831 178 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 PITX3O75364 302 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 IFNA17P01571 189 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 TRGV3P03979 118 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 OR13C7P0DN81 318 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 AREGP15514 252 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 ERHP84090 104 aaKnown RBP11.62□□□□□ -0.55
GARNL3-204ENST00000429629 WT1-ASQ06250 92 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 ZNF114Q8NC26 417 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 ZNF431Q8TF32 576 aaPredicted RBP11.62□□□□□ -0.55
GARNL3-204ENST00000429629 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 THYN1Q9P016 225 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 CACNG5Q9UF02 275 aa11.62□□□□□ -0.55
GARNL3-204ENST00000429629 TRAV6A0A075B6T7 132 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 FAM90A26D6RGX4 464 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 PTTG1O95997 202 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 IFNA21P01568 189 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 MYCNOSP40205 109 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 ATP5IP56385 69 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-204ENST00000429629 TPPP2P59282 170 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 IZUMO4Q1ZYL8 232 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 NSUN5P1Q3KNT7 163 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 PVRIGQ6DKI7 326 aa11.61□□□□□ -0.55
GARNL3-204ENST00000429629 OR2C3Q8N628 320 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms