RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 PDE6DO43924 150 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 ZNF253O75346 499 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 CD24P25063 80 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 GCHFRP30047 84 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 MMD2Q8IY49 270 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 C11orf42Q8N5U0 333 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 OR10W1Q8NGF6 305 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 OR10J1P30954 320 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 GPR6P46095 362 aaPredicted RBP10.32□□□□□ -0.76
CDH3-202ENST00000429102 ZNF718Q3SXZ3 478 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 NRN1LQ496H8 165 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 Q6ZN92 141 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 OR5AU1Q8NGC0 362 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 OR2V2Q96R30 315 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 PYGO2Q9BRQ0 406 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 CXXC4Q9H2H0 198 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 GP6Q9HCN6 339 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
CDH3-202ENST00000429102 RPLP1P05386 114 aaKnown RBP10.31□□□□□ -0.76
CDH3-202ENST00000429102 NPY1RP25929 384 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 PCP4P48539 62 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 EFNB3Q15768 340 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 CENPWQ5EE01 88 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 ARSJQ5FYB0 599 aaPredicted RBP10.31□□□□□ -0.76
CDH3-202ENST00000429102 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 C9orf106Q8NAJ2 232 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 TIMM9Q9Y5J7 89 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 PIGBOS1A0A0B4J2F0 54 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 GNG4P50150 75 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 MMDQ15546 238 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 SLC35E4Q6ICL7 350 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 C2orf88Q9BSF0 95 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 ASH1LQ9NR48 2969 aaKnown RBP10.31□□□□□ -0.76
CDH3-202ENST00000429102 PCSK5Q92824 1860 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 HELTA6NFD8 242 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 SIAH2O43255 324 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 SS18L1O75177 396 aaPredicted RBP10.31□□□□□ -0.76
CDH3-202ENST00000429102 CCKARP32238 428 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 GABRA6Q16445 453 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 DIRC2Q96SL1 478 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 CCL13Q99616 98 aa10.31□□□□□ -0.76
CDH3-202ENST00000429102 GFRA3O60609 400 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 CXorf1O96002 111 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 REG1AP05451 166 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 CYC1P08574 325 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 DLX1P56177 255 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 RPL15P61313 204 aaKnown RBP10.3□□□□□ -0.76
CDH3-202ENST00000429102 MAJINQ3KP22 176 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 MORN2Q502X0 79 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 FAM214BQ7L5A3 538 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 FDCSPQ8NFU4 85 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 OR9G1Q8NH87 305 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 ZCCHC14Q8WYQ9 949 aaKnown RBP10.3□□□□□ -0.76
CDH3-202ENST00000429102 TMEM106BQ9NUM4 274 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 DYSFO75923 2080 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 DIRC3C9JPN6 131 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 WNT2P09544 360 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 SRIP30626 198 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 TEPPQ6URK8 271 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 SLC24A4Q8NFF2 622 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 SSBP4Q9BWG4 385 aaPredicted RBP10.3□□□□□ -0.76
CDH3-202ENST00000429102 ITLN1Q8WWA0 313 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 FER1L6-AS2Q96M78 137 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 NPVFQ9HCQ7 196 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 KCNIP2Q9NS61 270 aa10.3□□□□□ -0.76
CDH3-202ENST00000429102 COLQQ9Y215 455 aaPredicted RBP10.3□□□□□ -0.76
CDH3-202ENST00000429102 IGKV1D-17A0A075B6S4 117 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 IGHV3-72A0A0B4J1Y9 119 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 MKRN2OSH3BPM6 223 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 MMP23AO75900 390 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 IGKV1-16P04430 117 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 MRPS11P82912 194 aaKnown RBP10.29□□□□□ -0.76
CDH3-202ENST00000429102 RAB31Q13636 194 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 RPRMLQ8N4K4 120 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 STARD4Q96DR4 205 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 ASCL2Q99929 193 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 TP73-AS1Q9UF72 201 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 S100A7P31151 101 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 CCL8P80075 99 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 MSMPQ1L6U9 139 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 Q56UQ5 140 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 OR4A47Q6IF82 309 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 FAM216BQ8N7L0 139 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 OR2T6Q8NHC8 308 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 RNASEH2CQ8TDP1 164 aaKnown RBP10.29□□□□□ -0.76
CDH3-202ENST00000429102 TMEM208Q9BTX3 173 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 GNB4Q9HAV0 340 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 ZNF586Q9NXT0 402 aa10.29□□□□□ -0.76
CDH3-202ENST00000429102 TECRQ9NZ01 308 aaKnown RBP10.29□□□□□ -0.76
CDH3-202ENST00000429102 ANKRD11Q6UB99 2663 aaPredicted RBP10.29□□□□□ -0.76
CDH3-202ENST00000429102 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
CDH3-202ENST00000429102 NPIPB11E5RHQ5 1161 aa10.28□□□□□ -0.76
CDH3-202ENST00000429102 VENTXO95231 258 aa10.28□□□□□ -0.76
CDH3-202ENST00000429102 OR5G3P0C626 314 aa10.28□□□□□ -0.76
CDH3-202ENST00000429102 LGALS4P56470 323 aa10.28□□□□□ -0.76
CDH3-202ENST00000429102 RHOBP62745 196 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms