RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SLC35G3Q8N808 338 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 ENKURQ8TC29 256 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 GALNT14Q96FL9 552 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 TBC1D24Q9ULP9 559 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 ANK2Q01484 3957 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 TET2Q6N021 2002 aaPredicted RBP11.35□□□□□ -0.59
SGCE-204ENST00000428696 A0A0B4J293 547 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 A0A1B0GW64 132 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 C15orf61A6NNL5 157 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 ADARB2-AS1A8MUL3 147 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 NXPH3O95157 252 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 SFT2D2O95562 160 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 HLA-AP01891 365 aaKnown RBP11.35□□□□□ -0.59
SGCE-204ENST00000428696 DEFA1P59665 94 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 DEFA3P59666 94 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 SRPXP78539 464 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 IFITM3Q01628 133 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 GPR146Q96CH1 333 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 TMEM56Q96MV1 263 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 C20orf85Q9H1P6 137 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 NUDT15Q9NV35 164 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 TMEM56-RWDD3S4R434 201 aa11.35□□□□□ -0.59
SGCE-204ENST00000428696 A0A0G2JRQ6 117 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 DHFRP00374 187 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 H2AFB2P0C5Z0 115 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 OR4E1P0C645 316 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 PSMB6P28072 239 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 SLC6A1P30531 599 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 CDX1P47902 265 aaPredicted RBP11.34□□□□□ -0.59
SGCE-204ENST00000428696 ASAH1Q13510 395 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 ANKRD55Q3KP44 614 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 TTC9CQ8N5M4 171 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 ZNF491Q8N8L2 437 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 UXS1Q8NBZ7 420 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 OR5B3Q8NH48 314 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 ALX4Q9H161 411 aaPredicted RBP11.34□□□□□ -0.59
SGCE-204ENST00000428696 SLA2Q9H6Q3 261 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
SGCE-204ENST00000428696 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 CACNG5Q9UF02 275 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 DNHD1Q96M86 4753 aa11.34□□□□□ -0.59
SGCE-204ENST00000428696 TNCP24821 2201 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 C9orf170A2RU37 121 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 ANKRD34BA5PLL1 514 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 ST8SIA3O43173 380 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 OR2J3O76001 311 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 HOXB5P09067 269 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 HSPE1P61604 102 aaKnown RBP11.33□□□□□ -0.6
SGCE-204ENST00000428696 RHOGP84095 191 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 Q6ZRM9 215 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 RNF152Q8N8N0 203 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 DPF1Q92782 380 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 UBE2E2Q96LR5 201 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 ENY2Q9NPA8 101 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 NDUFA4L2Q9NRX3 87 aa11.33□□□□□ -0.6
SGCE-204ENST00000428696 A0A0G2JLM5 398 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 CCL24O00175 119 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 UBE2MP61081 183 aaKnown RBP11.32□□□□□ -0.6
SGCE-204ENST00000428696 ATP5G2Q06055 141 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 FAM219AQ8IW50 185 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
SGCE-204ENST00000428696 CADM3Q8N126 398 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 C4orf3Q8WVX3 66 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 LSM10Q969L4 123 aaKnown RBP11.32□□□□□ -0.6
SGCE-204ENST00000428696 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 ZNF257Q9Y2Q1 563 aa11.32□□□□□ -0.6
SGCE-204ENST00000428696 A0A0B4J2A0 478 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 PIGBOS1A0A0B4J2F0 54 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 H3BUA1 57 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 CYB5BO43169 146 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 IGHV3-23P01764 117 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 FGF2P09038 288 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 SULT1A3P0DMM9 295 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 SULT1A4P0DMN0 295 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 HOXA1P49639 335 aaPredicted RBP11.31□□□□□ -0.6
SGCE-204ENST00000428696 ERHP84090 104 aaKnown RBP11.31□□□□□ -0.6
SGCE-204ENST00000428696 WT1-ASQ06250 92 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 DHRS2Q13268 280 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 KIAA0141Q14154 515 aaPredicted RBP11.31□□□□□ -0.6
SGCE-204ENST00000428696 LYG2Q86SG7 212 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 OR52B4Q8NGK2 314 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 OR1N2Q8NGR9 330 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 OR1S1Q8NH92 325 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 SHPKQ9UHJ6 478 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 S4R3C0 116 aa11.31□□□□□ -0.6
SGCE-204ENST00000428696 CEBPZOSA8MTT3 80 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 P0C879 139 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 CTRB1P17538 263 aa11.3□□□□□ -0.6
SGCE-204ENST00000428696 SNCAP37840 140 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms