RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PET100P0DJ07 73 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 IAPPP10997 89 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 CHRNA7P36544 502 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 POLR2GP62487 172 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 VAMP2P63027 116 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 SSBP2P81877 361 aaPredicted RBP6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 PRCDQ00LT1 54 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 SRSF2Q01130 221 aaKnown RBP6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 ECSCRQ19T08 205 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 TMEM95Q3KNT9 176 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 AARDQ4LEZ3 155 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZNF562Q6V9R5 426 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR52E5Q8NH55 327 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 DTD1Q8TEA8 209 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 PPP1R1CQ8WVI7 109 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 WDR89Q96FK6 387 aaPredicted RBP6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 NMES1Q9C002 83 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 RANGRFQ9HD47 186 aaPredicted RBP6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 HEYLQ9NQ87 328 aaPredicted RBP6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZFP57Q9NU63 452 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 RCL1Q9Y2P8 373 aaKnown RBP6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 A0A1B0GW64 132 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 IGLC7A0M8Q6 106 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 TEX22C9J3V5 150 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 H3BP45 60 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 SMLR1H3BR10 107 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 K7EPK0 472 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 AP4M1O00189 453 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 SYNGR2O43760 224 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 PFDN1O60925 122 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 REG1AP05451 166 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR13C7P0DN81 318 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 AREGP15514 252 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 PVALBP20472 110 aaPredicted RBP6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 PSMB6P28072 239 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 VDAC2P45880 294 aaPredicted RBP6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 SRSF4Q08170 494 aaKnown RBP6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 FGL1Q08830 312 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 RAB32Q13637 225 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 C11orf87Q6NUJ2 197 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 UNQ5815/PRO19632Q6UWF5 114 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 Q6ZS46 218 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 LFNGQ8NES3 379 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR10W1Q8NGF6 305 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR2T6Q8NHC8 308 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 CHAC2Q8WUX2 184 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 CIB3Q96Q77 187 aaPredicted RBP6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 HIPK2Q9H2X6 1198 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZNF702PQ9H963 129 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 NDUFA4L2Q9NRX3 87 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 PAIP2BQ9ULR5 123 aaKnown RBP6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 FBXO7Q9Y3I1 522 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 WSB1Q9Y6I7 421 aa6.25□□□□□ -1.41
HMGA1P4-201ENST00000428643 FXYD6-FXYD2A0A087WZ82 144 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 TRAV41A0A0B4J266 112 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 CGB1A6NKQ9 187 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 LINC01548A6NM66 108 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 E7EUB6 86 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 DEDDO75618 318 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 MPC2O95563 127 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 IGHG2P01859 326 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 RLN2P04090 185 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 SNCAP37840 140 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 CAV2P51636 162 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 RPL15P61313 204 aaKnown RBP6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 ERHP84090 104 aaKnown RBP6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 ID3Q02535 119 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 WT1-ASQ06250 92 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 IL15RAQ13261 267 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 PDLIM3Q53GG5 364 aaPredicted RBP6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 HSD17B13Q7Z5P4 300 aaPredicted RBP6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 SLC24A4Q8NFF2 622 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 SGMS2Q8NHU3 365 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 THAP6Q8TBB0 222 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 DCUN1D4Q92564 292 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 TAF15Q92804 592 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 NOL4LQ96MY1 436 aaPredicted RBP6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 RAB40CQ96S21 281 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 SRSF8Q9BRL6 282 aaKnown RBP6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 MBD2Q9UBB5 411 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 LINC00527Q9UJ94 153 aa6.24□□□□□ -1.41
HMGA1P4-201ENST00000428643 TRAV14DV4A0A0A6YYC5 116 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 G3V318 75 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 LY86O95711 162 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 TMEM50AO95807 157 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 IFNA10P01566 189 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 IGF1P05019 195 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 EGR2P11161 476 aaPredicted RBP6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 DEFA4P12838 97 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 NPY1RP25929 384 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 HTR2BP41595 481 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 RPL23AP62750 156 aaKnown RBP6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 CD300CQ08708 224 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 TMEM267Q0VDI3 215 aaPredicted RBP6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 SPANXN5Q5MJ07 72 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 PRSS54Q6PEW0 395 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 C19orf35Q6ZS72 473 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 Q6ZSV7 163 aa6.23□□□□□ -1.41
HMGA1P4-201ENST00000428643 TCTE3Q8IZS6 198 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms