RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 THAP7Q9BT49 309 aaPredicted RBP12.79□□□□□ -0.36
VRK2-204ENST00000428021 NDUFA4L2Q9NRX3 87 aa12.79□□□□□ -0.36
VRK2-204ENST00000428021 FBXL7Q9UJT9 491 aa12.79□□□□□ -0.36
VRK2-204ENST00000428021 DMRT1Q9Y5R6 373 aa12.79□□□□□ -0.36
VRK2-204ENST00000428021 IGLV11-55A0A075B6I3 123 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.78□□□□□ -0.36
VRK2-204ENST00000428021 SNAPC5O75971 98 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 SERPINE2P07093 398 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 TRAPPC2P0DI81 140 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 TRAPPC2BP0DI82 140 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 WT1-ASQ06250 92 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 CCDC190Q86UF4 302 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 ZNF429Q86V71 674 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 OR51S1Q8NGJ8 323 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 TRIM63Q969Q1 353 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 TMEM14BQ9NUH8 114 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
VRK2-204ENST00000428021 PRNDQ9UKY0 176 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 OR51B2Q9Y5P1 312 aa12.78□□□□□ -0.36
VRK2-204ENST00000428021 C3orf85A0A1B0GTC6 90 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 C15orf61A6NNL5 157 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 BMPR1BO00238 502 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 IGKV1-5P01602 117 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 P0C879 139 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 ECI1P42126 302 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 SP6Q3SY56 376 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 THOC7Q6I9Y2 204 aaKnown RBP12.77□□□□□ -0.37
VRK2-204ENST00000428021 TSC22D3Q99576 134 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 C5orf66Q9H5L9 145 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 SLC2A8Q9NY64 477 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 GPR132Q9UNW8 380 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 SORL1Q92673 2214 aa12.77□□□□□ -0.37
VRK2-204ENST00000428021 SAP30O75446 220 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 DHFRP00374 187 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 OR13C7P0DN81 318 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 DEFA4P12838 97 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 HIST1H1BP16401 226 aaKnown RBP12.76□□□□□ -0.37
VRK2-204ENST00000428021 S100A5P33763 92 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 KLF9Q13886 244 aaPredicted RBP12.76□□□□□ -0.37
VRK2-204ENST00000428021 SURF2Q15527 256 aaPredicted RBP12.76□□□□□ -0.37
VRK2-204ENST00000428021 IZUMO4Q1ZYL8 232 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 PYDC2Q56P42 97 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 IL34Q6ZMJ4 242 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 H2BFWTQ7Z2G1 175 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 CCDC71LQ8N9Z2 235 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 CCDC140Q96MF4 163 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 PRRT1Q99946 306 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 FKBP11Q9NYL4 201 aa12.76□□□□□ -0.37
VRK2-204ENST00000428021 IGHV3-23P01764 117 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 UCP1P25874 307 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 ETV6P41212 452 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 MFAP2P55001 183 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 HSD17B13Q7Z5P4 300 aaPredicted RBP12.75□□□□□ -0.37
VRK2-204ENST00000428021 Q8N402 240 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 OR6Q1Q8NGQ2 317 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 OR5B3Q8NH48 314 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 LSM10Q969L4 123 aaKnown RBP12.75□□□□□ -0.37
VRK2-204ENST00000428021 PRR25Q96S07 402 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 HINT2Q9BX68 163 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 S4R3C0 116 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 DNAH9Q9NYC9 4486 aa12.75□□□□□ -0.37
VRK2-204ENST00000428021 MFSD2BA6NFX1 497 aa12.74□□□□□ -0.37
VRK2-204ENST00000428021 PPP5D1E7EU14 171 aa12.74□□□□□ -0.37
VRK2-204ENST00000428021 RPEL1Q2QD12 228 aa12.74□□□□□ -0.37
VRK2-204ENST00000428021 OR9G4Q8NGQ1 327 aa12.74□□□□□ -0.37
VRK2-204ENST00000428021 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
VRK2-204ENST00000428021 GLYATL2Q8WU03 294 aa12.74□□□□□ -0.37
VRK2-204ENST00000428021 ELOVL1Q9BW60 279 aa12.74□□□□□ -0.37
VRK2-204ENST00000428021 C14orf166Q9Y224 244 aaKnown RBP12.74□□□□□ -0.37
VRK2-204ENST00000428021 ZNF256Q9Y2P7 627 aaPredicted RBP12.74□□□□□ -0.37
VRK2-204ENST00000428021 COL7A1Q02388 2944 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 A0A0B4J293 547 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 CRYM-AS1A6NIL9 109 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 FAM209BQ5JX69 171 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 CLEC19AQ6UXS0 136 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 LHFPL5Q8TAF8 219 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 TMEM222Q9H0R3 208 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 NAA60Q9H7X0 242 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 MCUBQ9NWR8 336 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 SCP2D1Q9UJQ7 156 aa12.73□□□□□ -0.37
VRK2-204ENST00000428021 LSM4Q9Y4Z0 139 aaKnown RBP12.73□□□□□ -0.37
VRK2-204ENST00000428021 F11RQ9Y624 299 aaKnown RBP12.73□□□□□ -0.37
VRK2-204ENST00000428021 A0A0G2JRQ6 117 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 TEX13DA0A0J9YY54 714 aaPredicted RBP12.72□□□□□ -0.37
VRK2-204ENST00000428021 CDS2O95674 445 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 HLA-AP01891 365 aaKnown RBP12.72□□□□□ -0.37
VRK2-204ENST00000428021 CSN3P07498 182 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 HSPE1P61604 102 aaKnown RBP12.72□□□□□ -0.37
VRK2-204ENST00000428021 TRIM16LQ309B1 348 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 HAPLN4Q86UW8 402 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 ZNF502Q8TBZ5 544 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 TMEM230Q96A57 120 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 EEF1AKMT3Q96AZ1 226 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms