RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 DEDD2Q8WXF8 326 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 TMEM68Q96MH6 324 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 CCDC32Q9BV29 185 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 NAA60Q9H7X0 242 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 PRR13Q9NZ81 148 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 COMMD9Q9P000 198 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 S4R3C0 116 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 C13orf42A0A1B0GVH6 325 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 CRYM-AS1A6NIL9 109 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 MARCH11A6NNE9 402 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 SAP30O75446 220 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 AKR1C4P17516 323 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 EDN2P20800 178 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 RHOGP84095 191 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 POU2AF1Q16633 256 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 IZUMO4Q1ZYL8 232 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 LHFPL5Q8TAF8 219 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 FANCD2OSQ96PS1 177 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 FYTTD1Q96QD9 318 aaKnown RBP9.74□□□□□ -0.85
GPC1-204ENST00000426280 BET1LQ9NYM9 111 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 FLVCR2Q9UPI3 526 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 ZNF256Q9Y2P7 627 aaPredicted RBP9.74□□□□□ -0.85
GPC1-204ENST00000426280 NSG2Q9Y328 171 aa9.74□□□□□ -0.85
GPC1-204ENST00000426280 UPK2O00526 184 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 LYRM1O43325 122 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 OR2J3O76001 311 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 NDUFB8O95169 186 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 IGHV3-23P01764 117 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 REG1AP05451 166 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 SERPINE2P07093 398 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 UCP1P25874 307 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 ERVK-16P61578 105 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 SUPT4H1P63272 117 aaKnown RBP9.73□□□□□ -0.85
GPC1-204ENST00000426280 TRIM16LQ309B1 348 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 ADAMTSL5Q6ZMM2 481 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 ZNF429Q86V71 674 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 VSTM2AQ8TAG5 236 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 GLYATL2Q8WU03 294 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 SEC22AQ96IW7 307 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 SCGB3A2Q96PL1 93 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 ASCL2Q99929 193 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 SLC25A21Q9BQT8 299 aaPredicted RBP9.73□□□□□ -0.85
GPC1-204ENST00000426280 C7orf50Q9BRJ6 194 aaKnown RBP9.73□□□□□ -0.85
GPC1-204ENST00000426280 RANGRFQ9HD47 186 aaPredicted RBP9.73□□□□□ -0.85
GPC1-204ENST00000426280 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
GPC1-204ENST00000426280 PEF1Q9UBV8 284 aaKnown RBP9.73□□□□□ -0.85
GPC1-204ENST00000426280 TBC1D24Q9ULP9 559 aa9.73□□□□□ -0.85
GPC1-204ENST00000426280 COL7A1Q02388 2944 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 A0A0G2JRQ6 117 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 CENPXA8MT69 81 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 BMPR1BO00238 502 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 UPK1BO75841 260 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 ACTL6BO94805 426 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 NDUFB6O95139 128 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 IGKV1-5P01602 117 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 RPL27AP46776 148 aaKnown RBP9.72□□□□□ -0.85
GPC1-204ENST00000426280 SYNJ2BPP57105 145 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 RPL8P62917 257 aaKnown RBP9.72□□□□□ -0.85
GPC1-204ENST00000426280 RBMS2Q15434 407 aaKnown RBP9.72□□□□□ -0.85
GPC1-204ENST00000426280 SGPP2Q8IWX5 399 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 OR10W1Q8NGF6 305 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 SPIN2AQ99865 258 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 B9D2Q9BPU9 175 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 SPIN2BQ9BPZ2 258 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 AIFM2Q9BRQ8 373 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 TMEM222Q9H0R3 208 aa9.72□□□□□ -0.85
GPC1-204ENST00000426280 A0A0G2JLM5 398 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 DBX1A6NMT0 343 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 PPP5D1E7EU14 171 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 LY86O95711 162 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
GPC1-204ENST00000426280 CRYGCP07315 174 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 CSN3P07498 182 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 HLA-GP17693 338 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 INSL3P51460 131 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 OR2B8PP59922 312 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 ATP5G2Q06055 141 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 TMEM187Q14656 261 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 SELENOHQ8IZQ5 122 aaKnown RBP9.71□□□□□ -0.86
GPC1-204ENST00000426280 CENPSQ8N2Z9 138 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 OR4A5Q8NH83 315 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 USMG5Q96IX5 58 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 SELENOKQ9Y6D0 94 aa9.71□□□□□ -0.86
GPC1-204ENST00000426280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.7□□□□□ -0.86
GPC1-204ENST00000426280 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 NPIPB5A8MRT5 1133 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 CREBL2O60519 120 aaPredicted RBP9.7□□□□□ -0.86
GPC1-204ENST00000426280 CDS2O95674 445 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 IGLV1-51P01701 117 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 GP9P14770 177 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 CTRB1P17538 263 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 ANXA7P20073 488 aaKnown RBP9.7□□□□□ -0.86
GPC1-204ENST00000426280 PSMB6P28072 239 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 AKR1C2P52895 323 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 DHODHQ02127 395 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 CD69Q07108 199 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms