RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PYDC2Q56P42 97 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 TTC9CQ8N5M4 171 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 MARCH1Q8TCQ1 289 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 COPZ2Q9P299 210 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 RABL2AQ9UBK7 228 aaPredicted RBP9.88□□□□□ -0.83
VRK3-203ENST00000424804 RABL2BQ9UNT1 228 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 S4R3C0 116 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 A0A1B0GW64 132 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 TRBV12-3P01733 135 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 IGHV3-23P01764 117 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 SERPINE2P07093 398 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 ZNF735P0CB33 412 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 SSBP1Q04837 148 aaKnown RBP9.87□□□□□ -0.83
VRK3-203ENST00000424804 MEF2DQ14814 521 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 OR4C16Q8NGL9 310 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 OR13C8Q8NGS7 320 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 TERB2Q8NHR7 220 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 ZFAND1Q8TCF1 268 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 MRGPRFQ96AM1 343 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 USMG5Q96IX5 58 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 OR4C12Q96R67 309 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 MCUBQ9NWR8 336 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 PEF1Q9UBV8 284 aaKnown RBP9.87□□□□□ -0.83
VRK3-203ENST00000424804 FBXL7Q9UJT9 491 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 C14orf166Q9Y224 244 aaKnown RBP9.87□□□□□ -0.83
VRK3-203ENST00000424804 ZNF257Q9Y2Q1 563 aa9.87□□□□□ -0.83
VRK3-203ENST00000424804 TEX50A0A1B0GTY4 177 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 FAM223BA6NKX1 122 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 CTDSPLO15194 276 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 DHFRP00374 187 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 CD74P04233 296 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 TRAPPC2P0DI81 140 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 TRAPPC2BP0DI82 140 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 PSMB6P28072 239 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 POU2AF1Q16633 256 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 TRIM16LQ309B1 348 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 C15orf32Q32M92 178 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 SP6Q3SY56 376 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 H2BFWTQ7Z2G1 175 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 LHFPL1Q86WI0 220 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 FAM223AQ8IWN6 122 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 CCDC71LQ8N9Z2 235 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 OR10W1Q8NGF6 305 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 ZNF486Q96H40 463 aaPredicted RBP9.86□□□□□ -0.83
VRK3-203ENST00000424804 QTRT1Q9BXR0 403 aaKnown RBP9.86□□□□□ -0.83
VRK3-203ENST00000424804 NXF2Q9GZY0 626 aaKnown RBP9.86□□□□□ -0.83
VRK3-203ENST00000424804 RBM38Q9H0Z9 239 aaKnown RBP9.86□□□□□ -0.83
VRK3-203ENST00000424804 OR51B2Q9Y5P1 312 aa9.86□□□□□ -0.83
VRK3-203ENST00000424804 LCE6AA0A183 80 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 C3orf85A0A1B0GTC6 90 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 IZUMO1RA6ND01 250 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 CGB1A6NKQ9 187 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 NPIPB5A8MRT5 1133 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 NDUFB8O95169 186 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 CSN3P07498 182 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 LYL1P12980 280 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 ZP3P21754 424 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 AKR1C2P52895 323 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 RPEL1Q2QD12 228 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 ZNF343Q6P1L6 599 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 ADAMTSL5Q6ZMM2 481 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 NECAP1Q8NC96 275 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 OR51S1Q8NGJ8 323 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 OR1L8Q8NGR8 309 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 OR4A16Q8NH70 328 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 RNASE11Q8TAA1 199 aaKnown RBP9.85□□□□□ -0.83
VRK3-203ENST00000424804 TP53RKQ96S44 253 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 ZMAT4Q9H898 229 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 ALMS1Q8TCU4 4167 aa9.85□□□□□ -0.83
VRK3-203ENST00000424804 TEX13DA0A0J9YY54 714 aaPredicted RBP9.84□□□□□ -0.83
VRK3-203ENST00000424804 PPP5D1E7EU14 171 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 H0Y980 276 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 GSTZ1O43708 216 aaPredicted RBP9.84□□□□□ -0.83
VRK3-203ENST00000424804 IGKV1-39P01597 117 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 IGKV1D-39P04432 117 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 CTSDP07339 412 aaPredicted RBP9.84□□□□□ -0.83
VRK3-203ENST00000424804 OR13C7P0DN81 318 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 CTRB1P17538 263 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 SYNJ2BPP57105 145 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 CTRB2Q6GPI1 263 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 LINC00322Q6ZN03 302 aaPredicted RBP9.84□□□□□ -0.83
VRK3-203ENST00000424804 OR9G4Q8NGQ1 327 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 TSC22D3Q99576 134 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 ELOVL1Q9BW60 279 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 SIGLEC8Q9NYZ4 499 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 PRNDQ9UKY0 176 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 DMRT1Q9Y5R6 373 aa9.84□□□□□ -0.83
VRK3-203ENST00000424804 TRBV9A0A0B4J1U6 114 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 IGLC7A0M8Q6 106 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 ANKRD20A5PA0PJZ0 165 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 HLA-AP01891 365 aaKnown RBP9.83□□□□□ -0.84
VRK3-203ENST00000424804 HIST1H1BP16401 226 aaKnown RBP9.83□□□□□ -0.84
VRK3-203ENST00000424804 RND3P61587 244 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 HAGHQ16775 308 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 TATDN3Q17R31 274 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 IZUMO4Q1ZYL8 232 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 SPINK9Q5DT21 86 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 ZFAND6Q6FIF0 208 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 SLC25A24Q6NUK1 477 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 CLEC19AQ6UXS0 136 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms