RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ST8SIA3O43173 380 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 ADAP1O75689 374 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 IGHG4P01861 327 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 APELAP0DMC3 54 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 SMCO1Q147U7 214 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 OXA1LQ15070 435 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 GGNBP1Q5YKI7 109 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 THOC7Q6I9Y2 204 aaKnown RBP13.31□□□□□ -0.28
COL7A1-202ENST00000422991 C12orf45Q8N5I9 185 aaPredicted RBP13.31□□□□□ -0.28
COL7A1-202ENST00000422991 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
COL7A1-202ENST00000422991 SRSF8Q9BRL6 282 aaKnown RBP13.31□□□□□ -0.28
COL7A1-202ENST00000422991 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.31□□□□□ -0.28
COL7A1-202ENST00000422991 A0A1B0GU03 582 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 A0A1W2PN81 502 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 IGLC7A0M8Q6 106 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 SNRPGP15A8MWD9 76 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 SOX15O60248 233 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 TRAPPC2P0DI81 140 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 TRAPPC2BP0DI82 140 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 SLC25A6P12236 298 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 CHRNA7P36544 502 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 HSPE1P61604 102 aaKnown RBP13.3□□□□□ -0.28
COL7A1-202ENST00000422991 PRCDQ00LT1 54 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 COMMD1Q8N668 190 aa13.3□□□□□ -0.28
COL7A1-202ENST00000422991 FAM110DQ8TAY7 271 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-202ENST00000422991 C7orf66A4D0T2 115 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 NPIPB5A8MRT5 1133 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 AREGP15514 252 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 FOXE3Q13461 319 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 TATDN3Q17R31 274 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 TCTEX1D4Q5JR98 221 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 TEX38Q6PEX7 206 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 RNF152Q8N8N0 203 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 OR10W1Q8NGF6 305 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 OR4X2Q8NGF9 303 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 ZNF747Q9BV97 191 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 HINT2Q9BX68 163 aa13.29□□□□□ -0.28
COL7A1-202ENST00000422991 PITX3O75364 302 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 FBXO24O75426 580 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 IFNA21P01568 189 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 CD28P10747 220 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 PSMB8P28062 276 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 WT1-ASQ06250 92 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 SRSF4Q08170 494 aaKnown RBP13.28□□□□□ -0.28
COL7A1-202ENST00000422991 PDLIM3Q53GG5 364 aaPredicted RBP13.28□□□□□ -0.28
COL7A1-202ENST00000422991 HSD17B13Q7Z5P4 300 aaPredicted RBP13.28□□□□□ -0.28
COL7A1-202ENST00000422991 TTC9CQ8N5M4 171 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 C3orf56Q8N813 242 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 UXS1Q8NBZ7 420 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 OR5T1Q8NG75 326 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 OR52E5Q8NH55 327 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 CITED1Q99966 193 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 PDCD10Q9BUL8 212 aa13.28□□□□□ -0.28
COL7A1-202ENST00000422991 MPTX1A8MV57 137 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 IFNA17P01571 189 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 ELANEP08246 267 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 SPCS3P61009 180 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 SPINK9Q5DT21 86 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 C11orf44Q8N8P7 122 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 OR1S1Q8NH92 325 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 PLEKHA3Q9HB20 300 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 CACFD1Q9UGQ2 172 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
COL7A1-202ENST00000422991 H3BUA1 57 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 CCSO14618 274 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 NXPH3O95157 252 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 REG1AP05451 166 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 CRYGCP07315 174 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 OR13C7P0DN81 318 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 CTRB1P17538 263 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 PSMB6P28072 239 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 CD83Q01151 205 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 TNFRSF9Q07011 255 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 CXorf66Q5JRM2 361 aaPredicted RBP13.26□□□□□ -0.29
COL7A1-202ENST00000422991 CTRB2Q6GPI1 263 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 C19orf35Q6ZS72 473 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 LCNL1Q6ZST4 164 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
COL7A1-202ENST00000422991 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 OR10C1Q96KK4 312 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 KLK15Q9H2R5 256 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 HSPB7Q9UBY9 170 aa13.26□□□□□ -0.29
COL7A1-202ENST00000422991 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
COL7A1-202ENST00000422991 BRI3O95415 125 aa13.25□□□□□ -0.29
COL7A1-202ENST00000422991 RPLP1P05386 114 aaKnown RBP13.25□□□□□ -0.29
COL7A1-202ENST00000422991 PF4V1P10720 104 aa13.25□□□□□ -0.29
COL7A1-202ENST00000422991 HOXA1P49639 335 aaPredicted RBP13.25□□□□□ -0.29
COL7A1-202ENST00000422991 C2orf68Q2NKX9 166 aa13.25□□□□□ -0.29
COL7A1-202ENST00000422991 HIST2H2BDQ6DRA6 164 aa13.25□□□□□ -0.29
COL7A1-202ENST00000422991 CITED2Q99967 270 aaPredicted RBP13.25□□□□□ -0.29
COL7A1-202ENST00000422991 VWFP04275 2813 aa13.24□□□□□ -0.29
COL7A1-202ENST00000422991 FAM90A26D6RGX4 464 aa13.24□□□□□ -0.29
COL7A1-202ENST00000422991 IAH1Q2TAA2 248 aaPredicted RBP13.24□□□□□ -0.29
COL7A1-202ENST00000422991 TMEM65Q6PI78 240 aa13.24□□□□□ -0.29
COL7A1-202ENST00000422991 OR2C3Q8N628 320 aa13.24□□□□□ -0.29
COL7A1-202ENST00000422991 ZBTB8BQ8NAP8 495 aaPredicted RBP13.24□□□□□ -0.29
COL7A1-202ENST00000422991 OR4D5Q8NGN0 318 aa13.24□□□□□ -0.29
COL7A1-202ENST00000422991 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms