RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 YPEL2Q96QA6 119 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 IFT22Q9H7X7 185 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 POLQO75417 2590 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 H3BUX3 64 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 NBR2O15453 112 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF207O43670 478 aaKnown RBP8.07□□□□□ -1.12
CMSS1-201ENST00000421999 TM4SF20Q53R12 229 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 OR4A47Q6IF82 309 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 HSD17B13Q7Z5P4 300 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-201ENST00000421999 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 BAGE2Q86Y30 109 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 SLC2A8Q9NY64 477 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 FBXL7Q9UJT9 491 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 A0A0G2JLM5 398 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 A0A1W2PPQ1 181 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 CGB1A6NKQ9 187 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 HMSDA8MTL9 139 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 MBPP02686 304 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-201ENST00000421999 ATP6V0CP27449 155 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 NDUFA6P56556 154 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 TMEM200BQ69YZ2 307 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 HEPN1Q6WQI6 88 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 VMO1Q7Z5L0 202 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 CD177Q8N6Q3 437 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-201ENST00000421999 OR52M1Q8NGK5 317 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 OR10C1Q96KK4 312 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 PXMP4Q9Y6I8 212 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 EBLN2Q6P2I7 272 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 RSG1Q9BU20 258 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF430Q9H8G1 570 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-201ENST00000421999 OR5AC2Q9NZP5 309 aa8.07□□□□□ -1.12
CMSS1-201ENST00000421999 TRBV6-7A0A0A0MS04 114 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 IGKV1D-13A0A0B4J2D9 117 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 FAM157CP0CG43 387 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 IGKV1-13P0DP09 117 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 NPPCP23582 126 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 GPR183P32249 361 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 GNG4P50150 75 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 SUMO1P63165 101 aaKnown RBP8.06□□□□□ -1.12
CMSS1-201ENST00000421999 C8orf46Q8TAG6 207 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 IGHV2-26A0A0B4J1V2 119 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 SPINK4O60575 86 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 IGHV1-8P0DP01 117 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 MIC13Q5XKP0 118 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF705GA8MUZ8 300 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF705FA8MVS1 300 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-201ENST00000421999 H0Y8G0 127 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 ORM1P02763 201 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 IL4P05112 153 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF705DP0CH99 300 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF705BP0CI00 300 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-201ENST00000421999 MPZP25189 248 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 STPG3Q8N7X2 389 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 LINC01356Q8N9X3 169 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF439Q8NDP4 499 aa8.06□□□□□ -1.12
CMSS1-201ENST00000421999 WDR61Q9GZS3 305 aaKnown RBP8.06□□□□□ -1.12
CMSS1-201ENST00000421999 M0QZK8 103 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 NDUFS8O00217 210 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 MSMBP08118 114 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 BTCP35070 178 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 VDAC2P45880 294 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-201ENST00000421999 HLA-DRB5Q30154 266 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 AARDQ4LEZ3 155 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 SLC16A13Q7RTY0 426 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 BPIFA4PQ86YQ2 179 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 SRSF12Q8WXF0 261 aaKnown RBP8.05□□□□□ -1.12
CMSS1-201ENST00000421999 C1orf147Q96MC9 270 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-201ENST00000421999 PAXXQ9BUH6 204 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 PRORYQ9H606 182 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 PKD1L2Q7Z442 2459 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 FAM90A26D6RGX4 464 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 WNT2P09544 360 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 WDR86Q86TI4 376 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 CLDND2Q8NHS1 167 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 DMRTA2Q96SC8 542 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 TOLLIPQ9H0E2 274 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 TRAV30A0A087WSZ9 112 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 SOD3P08294 240 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 SAA1P0DJI8 122 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-201ENST00000421999 TMEM187Q14656 261 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 NHLRC3Q5JS37 347 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 TEX261Q6UWH6 196 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 IGKV1D-17A0A075B6S4 117 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 IGLV3-1P01715 115 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 HIST1H1EP10412 219 aaKnown RBP8.05□□□□□ -1.12
CMSS1-201ENST00000421999 ADORA2A-AS1P86434 159 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 LRRC75BQ2VPJ9 315 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 ZNF738Q8NE65 137 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 OR5AU1Q8NGC0 362 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 IL22RA2Q969J5 263 aa8.05□□□□□ -1.12
CMSS1-201ENST00000421999 TRAV20A0A0B4J274 112 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 HSBP1L1C9JCN9 74 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 C11orf94C9JXX5 98 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 H3BTX0 84 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 PAGE4O60829 102 aa8.04□□□□□ -1.12
CMSS1-201ENST00000421999 EIF3GO75821 320 aaKnown RBP eCLIP8.04□□□□□ -1.12
CMSS1-201ENST00000421999 OR2C1O95371 312 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms