RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 GABRA6Q16445 453 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 OR10J3Q5JRS4 329 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 Q6ZVH6 145 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 NIT1Q86X76 327 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 LAMTOR2Q9Y2Q5 125 aa17.55■□□□□ 0.4
USP48-205ENST00000421625 SAA2-SAA4A0A096LPE2 208 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 HELTA6NFD8 242 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 TCF19Q9Y242 345 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 C15orf65H3BRN8 121 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 BMPR1BO00238 502 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 ZNF324O75467 553 aaPredicted RBP17.54■□□□□ 0.4
USP48-205ENST00000421625 MT-CO2P00403 227 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 MAJINQ3KP22 176 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 TEPPQ6URK8 271 aa17.54■□□□□ 0.4
USP48-205ENST00000421625 CER1O95813 267 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 IGFBP2P18065 325 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 PSG5Q15238 335 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 LINC00696Q6ZRV3 163 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 TMEM140Q9NV12 185 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 MT-ND6P03923 174 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 ASPHD1Q5U4P2 390 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 ABHD17BQ5VST6 288 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 WDR73Q6P4I2 378 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 OR52E5Q8NH55 327 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 SPINT2O43291 252 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 ERVK-16P61578 105 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 ASCL3Q9NQ33 180 aa17.53■□□□□ 0.4
USP48-205ENST00000421625 DPRXA6NFQ7 191 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 CCL25O15444 150 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 NTF3P20783 257 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 MRPL49Q13405 166 aaKnown RBP17.52■□□□□ 0.4
USP48-205ENST00000421625 C6orf15Q6UXA7 325 aaPredicted RBP17.52■□□□□ 0.4
USP48-205ENST00000421625 WDR82Q6UXN9 313 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 KLF14Q8TD94 323 aaPredicted RBP17.52■□□□□ 0.4
USP48-205ENST00000421625 FAM122AQ96E09 287 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 ARRDC1-AS1Q9H2J1 176 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 TUBG2Q9NRH3 451 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 GNG12Q9UBI6 72 aa17.52■□□□□ 0.4
USP48-205ENST00000421625 FAM90A9PA6NNJ1 464 aa17.52■□□□□ 0.39
USP48-205ENST00000421625 AREGP15514 252 aa17.52■□□□□ 0.39
USP48-205ENST00000421625 CDC42EP3Q9UKI2 254 aa17.52■□□□□ 0.39
USP48-205ENST00000421625 EP300Q09472 2414 aaPredicted RBP17.51■□□□□ 0.39
USP48-205ENST00000421625 OR10J4P0C629 311 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 PRRX1P54821 245 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 TSKUQ8WUA8 353 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 C20orf202A1L168 122 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 LCN12Q6JVE5 192 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 GCNT2Q8N0V5 402 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 FAM216AQ8WUB2 273 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 FZR1Q9UM11 496 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 PRR14LQ5THK1 2151 aa17.51■□□□□ 0.39
USP48-205ENST00000421625 CA2P00918 260 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 MYOD1P15172 320 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 PEAR1Q5VY43 1037 aaPredicted RBP17.5■□□□□ 0.39
USP48-205ENST00000421625 ETFRF1Q6IPR1 90 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 PRR7Q8TB68 274 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 RNASE8Q8TDE3 154 aaKnown RBP17.5■□□□□ 0.39
USP48-205ENST00000421625 ASPMQ8IZT6 3477 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 J3QW42 95 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 MMP23AO75900 390 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 CA1P00915 261 aaPredicted RBP17.5■□□□□ 0.39
USP48-205ENST00000421625 AMY1AP04745 511 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 NPY1RP25929 384 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 HINT1P49773 126 aaPredicted RBP17.5■□□□□ 0.39
USP48-205ENST00000421625 PRR20EP86478 221 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 PRR20CP86479 221 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 PRR20DP86480 221 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 PRR20BP86481 221 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 PRR20AP86496 221 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 CD177Q8N6Q3 437 aa17.5■□□□□ 0.39
USP48-205ENST00000421625 ZNF891A8MT65 544 aaPredicted RBP17.49■□□□□ 0.39
USP48-205ENST00000421625 LYZL6O75951 148 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 ADH4P08319 380 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 LINC00869P0C866 280 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 ZNF134P52741 427 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 MORN2Q502X0 79 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 C1orf229Q6ZS94 237 aaPredicted RBP17.49■□□□□ 0.39
USP48-205ENST00000421625 OSTCQ9NRP0 149 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 IL19Q9UHD0 177 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 PRRC2CQ9Y520 2896 aaKnown RBP17.49■□□□□ 0.39
USP48-205ENST00000421625 TNFSF15O95150 251 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 MGST1P10620 155 aaKnown RBP17.49■□□□□ 0.39
USP48-205ENST00000421625 PTTG1IPP53801 180 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 UTF1Q5T230 341 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 SLC24A4Q8NFF2 622 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 ZNF503Q96F45 646 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 SERTAD4Q9NUC0 356 aa17.49■□□□□ 0.39
USP48-205ENST00000421625 IGLV2-8P01709 118 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 TIGITQ495A1 244 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 UNQ5815/PRO19632Q6UWF5 114 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 GGTLC3B5MD39 225 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 M0R296 226 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 MOB3BQ86TA1 216 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 S1PR3Q99500 378 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 GATA2P23769 480 aaPredicted RBP17.48■□□□□ 0.39
USP48-205ENST00000421625 BPIFB3P59826 476 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 RPL19P84098 196 aaKnown RBP17.48■□□□□ 0.39
USP48-205ENST00000421625 RAB31Q13636 194 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 FAM214BQ7L5A3 538 aa17.48■□□□□ 0.39
USP48-205ENST00000421625 NHLRC2Q8NBF2 726 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 428.8 ms