RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TRAPPC2BP0DI82 140 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 SLC25A6P12236 298 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 PPIFP30405 207 aaKnown RBP13.76□□□□□ -0.21
LINC00271-201ENST00000421378 CHRNA7P36544 502 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 HSPE1P61604 102 aaKnown RBP13.76□□□□□ -0.21
LINC00271-201ENST00000421378 CFHR3Q02985 330 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 AARDQ4LEZ3 155 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 ASPHD1Q5U4P2 390 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 TET2Q6N021 2002 aaPredicted RBP13.76□□□□□ -0.21
LINC00271-201ENST00000421378 WFDC12Q8WWY7 111 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 CACFD1Q9UGQ2 172 aa13.76□□□□□ -0.21
LINC00271-201ENST00000421378 MPTX1A8MV57 137 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 PRCDQ00LT1 54 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 C10orf99Q6UWK7 81 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 OR5AU1Q8NGC0 362 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 OR1S1Q8NH92 325 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 WIPF2Q8TF74 440 aaPredicted RBP13.75□□□□□ -0.21
LINC00271-201ENST00000421378 SRSF8Q9BRL6 282 aaKnown RBP13.75□□□□□ -0.21
LINC00271-201ENST00000421378 ALG5Q9Y673 324 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 COL6A5A8TX70 2615 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 IGLC7A0M8Q6 106 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 CCSO14618 274 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 SSNA1O43805 119 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 NXPH3O95157 252 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 TEX38Q6PEX7 206 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 HSD17B13Q7Z5P4 300 aaPredicted RBP13.75□□□□□ -0.21
LINC00271-201ENST00000421378 OR10W1Q8NGF6 305 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 OR4X2Q8NGF9 303 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 OR5M8Q8NGP6 311 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 OR52E5Q8NH55 327 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 MDFIQ99750 246 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 PLEKHA3Q9HB20 300 aa13.75□□□□□ -0.21
LINC00271-201ENST00000421378 SOX15O60248 233 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 PITX3O75364 302 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 IGHG4P01861 327 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 AREGP15514 252 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 SPCS3P61009 180 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 KRTAP21-3Q3LHN1 58 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 MRPL41Q8IXM3 137 aaKnown RBP13.74□□□□□ -0.21
LINC00271-201ENST00000421378 COMMD1Q8N668 190 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 OR5T1Q8NG75 326 aa13.74□□□□□ -0.21
LINC00271-201ENST00000421378 FAM25EA8MYX2 175 aa13.73□□□□□ -0.21
LINC00271-201ENST00000421378 HOXA1P49639 335 aaPredicted RBP13.73□□□□□ -0.21
LINC00271-201ENST00000421378 WT1-ASQ06250 92 aa13.73□□□□□ -0.21
LINC00271-201ENST00000421378 IAH1Q2TAA2 248 aaPredicted RBP13.73□□□□□ -0.21
LINC00271-201ENST00000421378 PDLIM3Q53GG5 364 aaPredicted RBP13.73□□□□□ -0.21
LINC00271-201ENST00000421378 C12orf54Q6X4T0 127 aa13.73□□□□□ -0.21
LINC00271-201ENST00000421378 TTC9CQ8N5M4 171 aa13.73□□□□□ -0.21
LINC00271-201ENST00000421378 FAM110DQ8TAY7 271 aaPredicted RBP13.73□□□□□ -0.21
LINC00271-201ENST00000421378 OR10C1Q96KK4 312 aa13.73□□□□□ -0.21
LINC00271-201ENST00000421378 HSPB7Q9UBY9 170 aa13.73□□□□□ -0.21
LINC00271-201ENST00000421378 C13orf42A0A1B0GVH6 325 aa13.72□□□□□ -0.21
LINC00271-201ENST00000421378 C5orf51A6NDU8 294 aa13.72□□□□□ -0.21
LINC00271-201ENST00000421378 NPIPB5A8MRT5 1133 aa13.72□□□□□ -0.21
LINC00271-201ENST00000421378 IGLV1-40P01703 118 aa13.72□□□□□ -0.21
LINC00271-201ENST00000421378 REG1AP05451 166 aa13.72□□□□□ -0.21
LINC00271-201ENST00000421378 OR13C7P0DN81 318 aa13.72□□□□□ -0.21
LINC00271-201ENST00000421378 TNFRSF9Q07011 255 aa13.72□□□□□ -0.21
LINC00271-201ENST00000421378 FAM90A26D6RGX4 464 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 GOSR2O14653 212 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 FBXO24O75426 580 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 ELANEP08246 267 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 PSMB8P28062 276 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 PSMB6P28072 239 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 FOXE3Q13461 319 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 GSG1LQ6UXU4 331 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 C11orf44Q8N8P7 122 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 ENY2Q9NPA8 101 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 ZNF355PQ9NSJ1 428 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 TENM1Q9UKZ4 2725 aa13.71□□□□□ -0.21
LINC00271-201ENST00000421378 CEBPZOSA8MTT3 80 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 CRYGCP07315 174 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 PF4V1P10720 104 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 DEFA4P12838 97 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 CTRB1P17538 263 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 KRTAP10-3P60369 221 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 C2orf68Q2NKX9 166 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 CXorf66Q5JRM2 361 aaPredicted RBP13.71□□□□□ -0.22
LINC00271-201ENST00000421378 CTRB2Q6GPI1 263 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 TMEM65Q6PI78 240 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 C3orf56Q8N813 242 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 GSKIPQ9P0R6 139 aa13.71□□□□□ -0.22
LINC00271-201ENST00000421378 INS-IGF2F8WCM5 200 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 H3BUA1 57 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 CD28P10747 220 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 ERHP84090 104 aaKnown RBP13.7□□□□□ -0.22
LINC00271-201ENST00000421378 TCTEX1D4Q5JR98 221 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 C19orf35Q6ZS72 473 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 LCNL1Q6ZST4 164 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 OR2C3Q8N628 320 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 RNF152Q8N8N0 203 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 ZBTB8BQ8NAP8 495 aaPredicted RBP13.7□□□□□ -0.22
LINC00271-201ENST00000421378 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 SLA2Q9H6Q3 261 aa13.7□□□□□ -0.22
LINC00271-201ENST00000421378 PRH1P02810 166 aa13.69□□□□□ -0.22
LINC00271-201ENST00000421378 NKX2-1P43699 371 aaPredicted RBP13.69□□□□□ -0.22
LINC00271-201ENST00000421378 RAB9AP51151 201 aa13.69□□□□□ -0.22
LINC00271-201ENST00000421378 SRSF4Q08170 494 aaKnown RBP13.69□□□□□ -0.22
LINC00271-201ENST00000421378 KHDC1LQ5JSQ8 128 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms