RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 A0A1B0GW64 132 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 A0A1W2PRD5 423 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 A0A1W2PRF3 423 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 A0A1W2PRM7 423 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 BTBD17A6NE02 478 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 NUPL2O15504 423 aaKnown RBP16.85■□□□□ 0.29
GPC1-202ENST00000420138 OPN1MWP04001 364 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 CRYGBP07316 175 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 OR8U8P0C7N1 319 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 OPN1MW2P0DN77 364 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 OPN1MW3P0DN78 364 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 USF1P22415 310 aaPredicted RBP16.85■□□□□ 0.29
GPC1-202ENST00000420138 CNTFRP26992 372 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 HOXA1P49639 335 aaPredicted RBP16.85■□□□□ 0.29
GPC1-202ENST00000420138 RPL8P62917 257 aaKnown RBP16.85■□□□□ 0.29
GPC1-202ENST00000420138 HABP2Q14520 560 aaPredicted RBP16.85■□□□□ 0.29
GPC1-202ENST00000420138 OR5B3Q8NH48 314 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 VSTM2AQ8TAG5 236 aa16.85■□□□□ 0.29
GPC1-202ENST00000420138 PARD6GQ9BYG4 376 aaPredicted RBP16.85■□□□□ 0.29
GPC1-202ENST00000420138 EIF5A2Q9GZV4 153 aaKnown RBP16.85■□□□□ 0.29
GPC1-202ENST00000420138 FAM74A7A6NL05 159 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 PRSS46E5RG02 174 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 E7EUB6 86 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 TIMM23O14925 209 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 SLC25A17O43808 307 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 TOX4O94842 621 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 H2AFB1P0C5Y9 115 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 DSCR9P59020 149 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 LRRC75BQ2VPJ9 315 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 FAM74A3Q4VXF1 159 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 OR10P1Q8NGE3 313 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 LPAR2Q9HBW0 351 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 FKBP11Q9NYL4 201 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 FBXO7Q9Y3I1 522 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 HILPDAQ9Y5L2 63 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 TET2Q6N021 2002 aaPredicted RBP16.84■□□□□ 0.29
GPC1-202ENST00000420138 CGB1A6NKQ9 187 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 PAX6P26367 422 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 VWC2Q2TAL6 325 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 PSMG3Q9BT73 122 aaPredicted RBP16.84■□□□□ 0.29
GPC1-202ENST00000420138 ZNF430Q9H8G1 570 aaPredicted RBP16.84■□□□□ 0.29
GPC1-202ENST00000420138 NDUFA4L2Q9NRX3 87 aa16.84■□□□□ 0.29
GPC1-202ENST00000420138 BEX4Q9NWD9 120 aaPredicted RBP16.84■□□□□ 0.29
GPC1-202ENST00000420138 IFNA10P01566 189 aa16.83■□□□□ 0.28
GPC1-202ENST00000420138 PPT1P50897 306 aa16.83■□□□□ 0.28
GPC1-202ENST00000420138 ATP6V1FQ16864 119 aa16.83■□□□□ 0.28
GPC1-202ENST00000420138 VMA21Q3ZAQ7 101 aa16.83■□□□□ 0.28
GPC1-202ENST00000420138 SPSB3Q6PJ21 355 aa16.83■□□□□ 0.28
GPC1-202ENST00000420138 DYNAPQ8N1N2 210 aa16.83■□□□□ 0.28
GPC1-202ENST00000420138 WDR61Q9GZS3 305 aaKnown RBP16.83■□□□□ 0.28
GPC1-202ENST00000420138 PTPN13Q12923 2485 aa16.83■□□□□ 0.28
GPC1-202ENST00000420138 VENTXO95231 258 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 CEACAM3P40198 252 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 PSG5Q15238 335 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 CLEC12BQ2HXU8 276 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 DEFB113Q30KQ7 82 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 TEX45Q8NA69 505 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 PINX1Q96BK5 328 aaKnown RBP16.82■□□□□ 0.28
GPC1-202ENST00000420138 AJUBAQ96IF1 538 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 CLCC1Q96S66 551 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 HINT2Q9BX68 163 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 MED13LQ71F56 2210 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 A0A1B0GV50 99 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 MDKP21741 143 aaPredicted RBP16.82■□□□□ 0.28
GPC1-202ENST00000420138 RPP30P78346 268 aaKnown RBP16.82■□□□□ 0.28
GPC1-202ENST00000420138 RSG1Q9BU20 258 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 TMEM147Q9BVK8 224 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 SMDT1Q9H4I9 107 aa16.82■□□□□ 0.28
GPC1-202ENST00000420138 CD1BP29016 333 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 NPBWR1P48145 328 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 UBE2E1P51965 193 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 RAB2AP61019 212 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 PAX8Q06710 450 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 BSXQ3C1V8 233 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 FBLN7Q53RD9 439 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 C10orf55Q5SWW7 151 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 MINOS1Q5TGZ0 78 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 SLC24A4Q8NFF2 622 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 OR10W1Q8NGF6 305 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 COMMD5Q9GZQ3 224 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 PLEKHA3Q9HB20 300 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 MINOS1-NBL1R4GNA1 71 aa16.81■□□□□ 0.28
GPC1-202ENST00000420138 UBE2L5PA0A1B0GUS4 154 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 LOC105371267A0A1B0GV96 52 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 INS-IGF2F8WCM5 200 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 HBE1P02100 147 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 CCL20P78556 96 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 SERF2P84101 59 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 ETV3LQ6ZN32 361 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 OR1L8Q8NGR8 309 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 RNF5Q99942 180 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 SIGLEC9Q9Y336 463 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 CA2P00918 260 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 NPY1RP25929 384 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 SSX2Q16385 188 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 PRSS8Q16651 343 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 CLRN3Q8NCR9 226 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 TAF15Q92804 592 aaKnown RBP eCLIP16.8■□□□□ 0.28
GPC1-202ENST00000420138 ENY2Q9NPA8 101 aa16.8■□□□□ 0.28
GPC1-202ENST00000420138 KIAA1456Q9P272 454 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms