RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 CCL28Q9NRJ3 127 aa10.4□□□□□ -0.74
NFE4-201ENST00000420058 SCN3BQ9NY72 215 aa10.4□□□□□ -0.74
NFE4-201ENST00000420058 FBXL17Q9UF56 701 aa10.4□□□□□ -0.74
NFE4-201ENST00000420058 SMPXQ9UHP9 88 aa10.4□□□□□ -0.74
NFE4-201ENST00000420058 ETV7Q9Y603 341 aa10.4□□□□□ -0.74
NFE4-201ENST00000420058 OR4C46A6NHA9 309 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 MPTX1A8MV57 137 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 NDUFA4O00483 81 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 DEFB4AO15263 64 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 TNFSF12O43508 249 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 IFNA4P05014 189 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 SPAG16Q8N0X2 631 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 C2CD4CQ8TF44 421 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 BSCL2Q96G97 398 aaPredicted RBP10.39□□□□□ -0.75
NFE4-201ENST00000420058 SRSF8Q9BRL6 282 aaKnown RBP10.39□□□□□ -0.75
NFE4-201ENST00000420058 MFFQ9GZY8 342 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 ATG5Q9H1Y0 275 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 ANXA10Q9UJ72 324 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 HSPG2P98160 4391 aa10.39□□□□□ -0.75
NFE4-201ENST00000420058 IGHV3-21A0A0B4J1V1 117 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 TMEM235A6NFC5 223 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 K7EIM0 57 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 PDCD5O14737 125 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 RBFOX2O43251 390 aaKnown RBP eCLIP10.38□□□□□ -0.75
NFE4-201ENST00000420058 SERPINE2P07093 398 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 CTSGP08311 255 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 TCTAP57738 103 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 FAM90A2PQ658T7 463 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 GDPD1Q8N9F7 314 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 SCARB1Q8WTV0 552 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 C20orf24Q9BUV8 137 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 HRASLSQ9HDD0 168 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 THYN1Q9P016 225 aa10.38□□□□□ -0.75
NFE4-201ENST00000420058 C15orf62A8K5M9 175 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 CHEK1O14757 476 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 RGS10O43665 173 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 OR13C7P0DN81 318 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 RAB3BP20337 219 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 TAS2R31P59538 309 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 ARL6IP1Q15041 203 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 MSMO1Q15800 293 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 SLC25A24Q6NUK1 477 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 SPSB3Q6PJ21 355 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 GVQW1Q8N7I0 195 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 ATP6V0BQ99437 205 aa10.37□□□□□ -0.75
NFE4-201ENST00000420058 QTRT1Q9BXR0 403 aaKnown RBP10.37□□□□□ -0.75
NFE4-201ENST00000420058 ERICH4A6NGS2 130 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 IGLL5B9A064 214 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 SULT1C2O00338 296 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 HPRT1P00492 218 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 FGF2P09038 288 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 GIG44P09565 113 aaPredicted RBP10.36□□□□□ -0.75
NFE4-201ENST00000420058 NQO2P16083 231 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 FCGR2CP31995 323 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 PRSS48Q7RTY5 328 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 SECTM1Q8WVN6 248 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 RHPN1-AS1Q9BWJ2 59 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 COMMD5Q9GZQ3 224 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 NDUFA4L2Q9NRX3 87 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 TMEM140Q9NV12 185 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 C21orf62Q9NYP8 219 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 TPRKBQ9Y3C4 175 aa10.36□□□□□ -0.75
NFE4-201ENST00000420058 AGRNO00468 2067 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 IGHV3-49A0A0A0MS15 119 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 IGHV7-4-1A0A0J9YVY3 117 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 TRDV1A0A1B0GX56 115 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 SMIM30A4D0T7 59 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 TRAPPC2P0DI81 140 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 TRAPPC2BP0DI82 140 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 TFPI2P48307 235 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 LILRB2Q8N423 598 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 Q8NAQ8 132 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 OR10C1Q96KK4 312 aa10.35□□□□□ -0.75
NFE4-201ENST00000420058 F11RQ9Y624 299 aaKnown RBP10.35□□□□□ -0.75
NFE4-201ENST00000420058 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
NFE4-201ENST00000420058 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
NFE4-201ENST00000420058 MED14OSP0DP75 135 aa10.34□□□□□ -0.75
NFE4-201ENST00000420058 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
NFE4-201ENST00000420058 LINC00336Q6ZUF6 198 aa10.34□□□□□ -0.75
NFE4-201ENST00000420058 OR13F1Q8NGS4 319 aa10.34□□□□□ -0.75
NFE4-201ENST00000420058 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
NFE4-201ENST00000420058 C6orf62Q9GZU0 229 aaPredicted RBP10.34□□□□□ -0.75
NFE4-201ENST00000420058 PLEKHA2Q9HB19 425 aa10.34□□□□□ -0.75
NFE4-201ENST00000420058 LRP1BQ9NZR2 4599 aa10.34□□□□□ -0.75
NFE4-201ENST00000420058 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 XRCC3O43542 346 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 PPYP01298 95 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
NFE4-201ENST00000420058 GNG2P59768 71 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 THOC7Q6I9Y2 204 aaKnown RBP10.33□□□□□ -0.76
NFE4-201ENST00000420058 C22orf42Q6IC83 251 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 ZNF818PQ6ZRF7 136 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 GBGT1Q8N5D6 347 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 TMEM116Q8NCL8 245 aa10.33□□□□□ -0.76
NFE4-201ENST00000420058 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms