RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 OR8U8P0C7N1 319 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 APELAP0DMC3 54 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF182P17025 639 aaPredicted RBP5.33□□□□□ -1.56
HMGN1-205ENST00000419378 CD40LGP29965 261 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 KIR2DS2P43631 304 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 RFX2P48378 723 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 BRWD1-AS2P59051 145 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 TPPP2P59282 170 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 HERV-K104P61576 105 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF616Q08AN1 781 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 SPCS2Q15005 226 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 TNXAQ16473 311 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF818PQ6ZRF7 136 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 SNX29P2Q8IUI4 249 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 CLVS1Q8IUQ0 354 aaPredicted RBP5.33□□□□□ -1.56
HMGN1-205ENST00000419378 OR5T1Q8NG75 326 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 OR5H2Q8NGV7 314 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 MRAPQ8TCY5 172 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 GPX8Q8TED1 209 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 GIMAP1Q8WWP7 306 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 SRSF12Q8WXF0 261 aaKnown RBP5.33□□□□□ -1.56
HMGN1-205ENST00000419378 MOB3AQ96BX8 217 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 TMEM68Q96MH6 324 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 PHB2Q99623 299 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF2Q9BSG1 426 aaPredicted RBP5.33□□□□□ -1.56
HMGN1-205ENST00000419378 DCUN1D5Q9BTE7 237 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 SLC5A7Q9GZV3 580 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 FXYD6Q9H0Q3 95 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF430Q9H8G1 570 aaPredicted RBP5.33□□□□□ -1.56
HMGN1-205ENST00000419378 SCPEP1Q9HB40 452 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 HSPB7Q9UBY9 170 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 MSGN1A6NI15 193 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 FAM25AB3EWG3 89 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 FAM25CB3EWG5 89 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 FAM25GB3EWG6 89 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 SEC14L6B5MCN3 397 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 LINC01619G3V211 115 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 K7EIL1 84 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 SULT1C2O00338 296 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 RBFOX2O43251 390 aaKnown RBP eCLIP5.32□□□□□ -1.561e-18■□□□□ 8.3
HMGN1-205ENST00000419378 RAMP3O60896 148 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 KBTBD11O94819 623 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 OR2A4O95047 310 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 BRI3O95415 125 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 HRASP01112 189 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 HLA-DMAP28067 261 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 GNRHRP30968 328 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 RCVRNP35243 200 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 HRH1P35367 487 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 DEFA5Q01523 94 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 CATR1Q13166 79 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 C10orf55Q5SWW7 151 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 AADACL3Q5VUY0 350 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 DHRS11Q6UWP2 260 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 MMD2Q8IY49 270 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 SPAG16Q8N0X2 631 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 PUSL1Q8N0Z8 303 aaKnown RBP5.32□□□□□ -1.56
HMGN1-205ENST00000419378 ADAD2Q8NCV1 583 aaKnown RBP5.32□□□□□ -1.56
HMGN1-205ENST00000419378 OR51H1Q8NH63 302 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 VSTM2AQ8TAG5 236 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 TMEM167AQ8TBQ9 72 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 NTN5Q8WTR8 489 aaPredicted RBP5.32□□□□□ -1.56
HMGN1-205ENST00000419378 RAB2BQ8WUD1 216 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 BORCS5Q969J3 196 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 OR2A7Q96R45 310 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 SPIN2AQ99865 258 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 SPIN2BQ9BPZ2 258 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF355PQ9NSJ1 428 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 EXTL2Q9UBQ6 330 aa5.32□□□□□ -1.56
HMGN1-205ENST00000419378 C13orf42A0A1B0GVH6 325 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 WI2-2373I1.2A0A1W2PRP0 233 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 PGPEP1LA6NFU8 196 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 S1PR2O95136 353 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 HSPB1P04792 205 aaKnown RBP5.31□□□□□ -1.56
HMGN1-205ENST00000419378 RLN1P04808 185 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 OR9G9P0C7N8 305 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 DCTN2Q13561 401 aaKnown RBP5.31□□□□□ -1.56
HMGN1-205ENST00000419378 PIK3CD-AS1Q5SR53 167 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 C9orf66Q5T8R8 295 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 OR4A47Q6IF82 309 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 SSX9Q7RTT3 188 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 LAX1Q8IWV1 398 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 OR6F1Q8NGZ6 308 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 PRSS3P2Q8NHM4 247 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 DCUN1D4Q92564 292 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 DLX4Q92988 240 aaPredicted RBP5.31□□□□□ -1.56
HMGN1-205ENST00000419378 BCL7BQ9BQE9 202 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 MIXL1Q9H2W2 232 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 COA4Q9NYJ1 87 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 BET1LQ9NYM9 111 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
HMGN1-205ENST00000419378 COL7A1Q02388 2944 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 A0A0G2JLM5 398 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 A0A1B0GW64 132 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 E7EUB6 86 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 H3BMQ9 156 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 GPR31O00270 319 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 OVOL1O14753 267 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 RGS5O15539 181 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 NOL3O60936 208 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms