RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TAC3Q9UHF0 121 aa4.48□□□□□ -1.69
ECHDC1-206ENST00000417628 SAA2-SAA4A0A096LPE2 208 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 BORCS7-ASMTA0A0B4J1R7 106 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 PSMB11A5LHX3 300 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 OOEPA6NGQ2 149 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ANKRD30BLA7E2S9 258 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 RHODO00212 210 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 HSD17B6O14756 317 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 TAX1BP3O14907 124 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 SIVA1O15304 175 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 FCMRO60667 390 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 SS18L1O75177 396 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 PROP1O75360 226 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 GCM2O75603 506 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 DIRAS1O95057 198 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 HAND1O96004 215 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 IFNA1P01562 189 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 HBE1P02100 147 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 FUT1P19526 365 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ID1P41134 155 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ATP1B3P54709 279 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 SEC11AP67812 179 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 PRDX1Q06830 199 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 PLCXD2Q0VAA5 305 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 GINS1Q14691 196 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 PSG5Q15238 335 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 SGCBQ16585 318 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ANKRD55Q3KP44 614 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 CCSMST1Q4G0I0 132 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ENTPD8Q5MY95 495 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 TRIM40Q6P9F5 258 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF322Q6U7Q0 402 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF66Q6ZN08 573 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 Q6ZN92 141 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 SSX8Q7RTT4 187 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 SLC16A9Q7RTY1 509 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 TSEN54Q7Z6J9 526 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF567Q8N184 647 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 FADS6Q8N9I5 356 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 BOLLQ8N9W6 283 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 TMEM229BQ8NBD8 167 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 OR52B4Q8NGK2 314 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 LINC01006Q8NI28 216 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 PTPMT1Q8WUK0 201 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ESAMQ96AP7 390 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 GMPPAQ96IJ6 420 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 P2RX4Q99571 388 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 TBX5Q99593 518 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF649Q9BS31 505 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 OR51I1Q9H343 314 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 MED20Q9H944 212 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 AHSPQ9NZD4 102 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 FLRT3Q9NZU0 649 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 PCTPQ9UKL6 214 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 WDR45Q9Y484 360 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 KIAA1109Q2LD37 5005 aa4.47□□□□□ -1.69
ECHDC1-206ENST00000417628 TRAV1-1A0A0B4J248 108 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 TRBV5-4A0A0C4DH59 114 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 CENPVL3A0A0U1RRI6 287 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 hADV38S2A0JD32 116 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 A6NDN8 102 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 LINC01548A6NM66 108 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 A8MZ25 164 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 USP17L23D6RBM5 183 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 C17orf112F2Z3M2 114 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 K7N7A8 449 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 RAB29O14966 203 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 TAPBPO15533 448 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 FOXH1O75593 365 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 MPZL1O95297 269 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 C1orf105O95561 183 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 HLA-HP01893 362 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 PFN1P07737 140 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 SRP19P09132 144 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 LINC00032P0C843 101 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 LINC00869P0C866 280 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 HIST1H1DP16402 221 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 CELP19835 753 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 CDAP32320 146 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 PYCR1P32322 319 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 SOAT1P35610 550 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 GUCA1AP43080 201 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 SLC25A1P53007 311 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 TCL1AP56279 114 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 TCTAP57738 103 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 GNG3P63215 75 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 PAFAH1B3Q15102 231 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 TDRG1Q3Y452 100 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 SLC25A53Q5H9E4 307 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 DCST2Q5T1A1 773 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 NCBP2-AS2Q69YL0 99 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 SPSB3Q6PJ21 355 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 UNQ6126/PRO20091Q6UXV3 157 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 ASCL4Q6XD76 172 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 FAM57BQ71RH2 274 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 SLC25A42Q86VD7 318 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 OR4N5Q8IXE1 308 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 CA13Q8N1Q1 262 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 ZNF740Q8NDX6 193 aa4.46□□□□□ -1.7
ECHDC1-206ENST00000417628 OR51T1Q8NGJ9 327 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms