RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 AREGP15514 252 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 PARLQ9H300 379 aa13.13□□□□□ -0.31
PHRF1-203ENST00000416188 IGHV3OR16-13A0A075B7E8 117 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 IGHV3-74A0A0B4J1X5 117 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 MOSP00540 346 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 GGNQ86UU5 652 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 ANKRD36A6QL64 1941 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 MBD3L4A6NDZ8 208 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-203ENST00000416188 MBD3L3A6NE82 208 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-203ENST00000416188 MSGN1A6NI15 193 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 MBD3L5A6NJ08 208 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-203ENST00000416188 C2orf83Q53S99 150 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 OR4X2Q8NGF9 303 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 MBD3L2Q8NHZ7 208 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-203ENST00000416188 PRO3102Q9H379 93 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 IQCF6A8MYZ5 107 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 M0QZK8 103 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 GGCTO75223 188 aaKnown RBP13.12□□□□□ -0.31
PHRF1-203ENST00000416188 IGHG3P01860 377 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 C2orf68Q2NKX9 166 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 MRPL18Q9H0U6 180 aaKnown RBP13.12□□□□□ -0.31
PHRF1-203ENST00000416188 CRIM1Q9NZV1 1036 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 TRAV30A0A087WSZ9 112 aa13.12□□□□□ -0.31
PHRF1-203ENST00000416188 CA2P00918 260 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 ZNF146Q15072 292 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 NEU1Q99519 415 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 RALGAPA1Q6GYQ0 2036 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 CD8AP01732 235 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 DDB2Q92466 427 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 TM2D1Q9BX74 207 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 CDC42EP3Q9UKI2 254 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 NPIPB11E5RHQ5 1161 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 A0A1B0GTI1 187 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 IL4P05112 153 aa13.11□□□□□ -0.31
PHRF1-203ENST00000416188 REPIN1Q9BWE0 567 aaKnown RBP13.1□□□□□ -0.31
PHRF1-203ENST00000416188 GOLT1AQ6ZVE7 132 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 OR13A1Q8NGR1 328 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 ATP5G2Q06055 141 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 ZNF672Q499Z4 452 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-203ENST00000416188 IGFL3Q6UXB1 125 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 OR1P1Q8NH06 330 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 PHLDA3Q9Y5J5 127 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 PCNX2A6NKB5 2137 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 LOC102724200A0A096LPH7 203 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-203ENST00000416188 ZNF324O75467 553 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-203ENST00000416188 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 TECTAO75443 2155 aa13.1□□□□□ -0.31
PHRF1-203ENST00000416188 FAM208BQ5VWN6 2430 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 CX3CL1P78423 397 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 FAM166AQ6J272 317 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 FBLL1A6NHQ2 334 aaKnown RBP13.09□□□□□ -0.31
PHRF1-203ENST00000416188 LEPROTL1O95214 131 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 RPLP1P05386 114 aaKnown RBP13.09□□□□□ -0.31
PHRF1-203ENST00000416188 ANOS1P23352 680 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 LBHQ53QV2 105 aaPredicted RBP13.09□□□□□ -0.31
PHRF1-203ENST00000416188 GPR61Q9BZJ8 451 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 C17orf98A8MV24 154 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 H3BVH4 76 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 GCHFRP30047 84 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 SRIP30626 198 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 FOXG1P55316 489 aaPredicted RBP13.09□□□□□ -0.31
PHRF1-203ENST00000416188 CUL9Q8IWT3 2517 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 A0A1W2PRX2 142 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 GCGP01275 180 aa13.09□□□□□ -0.31
PHRF1-203ENST00000416188 RCC1LQ96I51 464 aaKnown RBP13.09□□□□□ -0.31
PHRF1-203ENST00000416188 KIF26BQ2KJY2 2108 aa13.08□□□□□ -0.31
PHRF1-203ENST00000416188 NPPCP23582 126 aa13.08□□□□□ -0.31
PHRF1-203ENST00000416188 S4R3C0 116 aa13.08□□□□□ -0.31
PHRF1-203ENST00000416188 GCSHP23434 173 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 FBXL15Q9H469 300 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 LOC105371267A0A1B0GV96 52 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 EFNA2O43921 213 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 OTX1P32242 354 aaPredicted RBP13.08□□□□□ -0.32
PHRF1-203ENST00000416188 CYB5R2Q6BCY4 276 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 MRPL13Q9BYD1 178 aaKnown RBP13.08□□□□□ -0.32
PHRF1-203ENST00000416188 A0A087WV48 116 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 MPTX1A8MV57 137 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 PSG9Q00887 426 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 RRN3P1Q2M238 152 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 MIEN1Q9BRT3 115 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 PSMG3Q9BT73 122 aaPredicted RBP13.08□□□□□ -0.32
PHRF1-203ENST00000416188 C19orf24Q9BVV8 132 aa13.08□□□□□ -0.32
PHRF1-203ENST00000416188 UCP1P25874 307 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 MBNL2Q5VZF2 373 aaKnown RBP13.07□□□□□ -0.32
PHRF1-203ENST00000416188 SYT8Q8NBV8 401 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 GALNT14Q96FL9 552 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 ATRAIDQ6UW56 229 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 CADP27708 2225 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 TM4SF5O14894 197 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 GPX1P07203 203 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 IL6RP08887 468 aaPredicted RBP13.07□□□□□ -0.32
PHRF1-203ENST00000416188 LINC00305Q7Z4B0 112 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 RTBDNQ9BSG5 229 aaPredicted RBP13.07□□□□□ -0.32
PHRF1-203ENST00000416188 PRB1P04280 392 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 AMY1AP04745 511 aa13.07□□□□□ -0.32
PHRF1-203ENST00000416188 MEF2CQ06413 473 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms