RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 HPGDSO60760 199 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 REG1AP05451 166 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 CLEC3BP05452 202 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 IL6RP08887 468 aaPredicted RBP11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 ZNF735P0CB33 412 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 MYOD1P15172 320 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 AREGP15514 252 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 BMI1P35226 326 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 HERV-K104P61576 105 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 CATR1Q13166 79 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 PLET1Q6UQ28 207 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 CLVS1Q8IUQ0 354 aaPredicted RBP11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 MFSD4AQ8N468 514 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 OR2C3Q8N628 320 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 SLC5A7Q9GZV3 580 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 EHFQ9NZC4 300 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 MRPL27Q9P0M9 148 aaKnown RBP11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 RABL2AQ9UBK7 228 aaPredicted RBP11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 RABL2BQ9UNT1 228 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 DMRT1Q9Y5R6 373 aa11.65□□□□□ -0.54
SBDSP1-201ENST00000415772 FAM25AB3EWG3 89 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 FAM25CB3EWG5 89 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 FAM25GB3EWG6 89 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 NOL3O60936 208 aaKnown RBP11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 HLA-GP17693 338 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 GPR183P32249 361 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 RCVRNP35243 200 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 DEFB135Q30KP9 77 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 LYG2Q86SG7 212 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 OR6F1Q8NGZ6 308 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 CD300LFQ8TDQ1 290 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 SECTM1Q8WVN6 248 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 FANCD2OSQ96PS1 177 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 CCL28Q9NRJ3 127 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 TP53TG1Q9Y2A0 90 aa11.64□□□□□ -0.55
SBDSP1-201ENST00000415772 IGHV3-35A0A0C4DH35 117 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 MEIS3P1A6NDR6 274 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 UBE2CO00762 179 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 CRYGCP07315 174 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 CTRB1P17538 263 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 LPCAT3Q6P1A2 487 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 CEMP1Q6PRD7 247 aaPredicted RBP11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 Q6ZWC4 215 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 LYSMD2Q8IV50 215 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 PUSL1Q8N0Z8 303 aaKnown RBP11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 OR4A5Q8NH83 315 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 MOB3AQ96BX8 217 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 COMMD5Q9GZQ3 224 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 CCDC59Q9P031 241 aaKnown RBP11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 UBQLN2Q9UHD9 624 aa11.63□□□□□ -0.55
SBDSP1-201ENST00000415772 MFSD2BA6NFX1 497 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 E7EUB6 86 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 TNFSF12O43508 249 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 TBPP20226 339 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 RFX2P48378 723 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 FXYD4P59646 89 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 MRPS10P82664 201 aaKnown RBP11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 TNFRSF9Q07011 255 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 SNX29P2Q8IUI4 249 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 SPAG8Q99932 426 aaPredicted RBP11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 ZNF2Q9BSG1 426 aaPredicted RBP11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 C6orf62Q9GZU0 229 aaPredicted RBP11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 EXTL2Q9UBQ6 330 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 ALMS1Q8TCU4 4167 aa11.62□□□□□ -0.55
SBDSP1-201ENST00000415772 PMP2P02689 132 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 FCER2P06734 321 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 FGF2P09038 288 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 S100GP29377 79 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 GNRHRP30968 328 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 HRH1P35367 487 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 TSPAN5P62079 268 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 SPCS2Q15005 226 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 UNQ9165/PRO28630Q6UXU0 137 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 WFDC3Q8IUB2 231 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 SPAG16Q8N0X2 631 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 DMBX1Q8NFW5 382 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 DYNC2LI1Q8TCX1 351 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 BET1LQ9NYM9 111 aa11.61□□□□□ -0.55
SBDSP1-201ENST00000415772 IGLV11-55A0A075B6I3 123 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 OR4C46A6NHA9 309 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 RGS5O15539 181 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 HPRT1P00492 218 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 HLA-DMAP28067 261 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 BRWD1-AS2P59051 145 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 TAS2R31P59538 309 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 ZNF818PQ6ZRF7 136 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 TMEM17Q86X19 198 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 CADM3Q8N126 398 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 FCAMRQ8WWV6 532 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 C5orf66Q9H5L9 145 aa11.6□□□□□ -0.55
SBDSP1-201ENST00000415772 PLEKHA2Q9HB19 425 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms