RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NPBQ8NG41 125 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 OR5AP2Q8NGF4 316 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 OR52I2Q8NH67 350 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 GRPEL2Q8TAA5 225 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 RAB2BQ8WUD1 216 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 CHPT1Q8WUD6 406 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 TCTEX1D2Q8WW35 142 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 ACOT12Q8WYK0 555 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 ISOC1Q96CN7 298 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 FLYWCH2Q96CP2 140 aaKnown RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 FAM210AQ96ND0 272 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 OR5B12Q96R08 314 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 DCUN1D5Q9BTE7 237 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 SLC5A7Q9GZV3 580 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 FXYD6Q9H0Q3 95 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 OR51J1Q9H342 316 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 NECAP2Q9NVZ3 263 aa3.8□□□□□ -1.8
VPS41-205ENST00000414632 RBMX2Q9Y388 322 aaKnown RBP3.8□□□□□ -1.8
VPS41-205ENST00000414632 TRAV41A0A0B4J266 112 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 A0A1W2PN81 502 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 G3V4G9 280 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 SULT1C2O00338 296 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 ARPC1BO15143 372 aaKnown RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 ST8SIA3O43173 380 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 RAMP3O60896 148 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 GAGE7O76087 117 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 DIRAS3O95661 229 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 PPYP01298 95 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 IGLV2-23P01705 113 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 PRB2P02812 416 aaPredicted RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 MYOD1P15172 320 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 RPA2P15927 270 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 HOXD3P31249 432 aaPredicted RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 HRH1P35367 487 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 CHRNA7P36544 502 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 CBX5P45973 191 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 TMBIM6P55061 237 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 RAB25P57735 213 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 HERV-K104P61576 105 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 RPL23AP62750 156 aaKnown RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 GAGE1Q13065 139 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 GAGE4Q13068 117 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 CBX3Q13185 183 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 RTL8BQ17RB0 113 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 PXDC1Q5TGL8 231 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 ZNF818PQ6ZRF7 136 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 PPP1R27Q86WC6 154 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 PDPNQ86YL7 162 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 GBGT1Q8N5D6 347 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 LFNGQ8NES3 379 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 OR5H2Q8NGV7 314 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 DYNC2LI1Q8TCX1 351 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 GPX8Q8TED1 209 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 AP3S1Q92572 193 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 MOB3AQ96BX8 217 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 ATP6V0BQ99437 205 aa3.79□□□□□ -1.8
VPS41-205ENST00000414632 TSNAXQ99598 290 aaKnown RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 ZNF2Q9BSG1 426 aaPredicted RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 C6orf62Q9GZU0 229 aaPredicted RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 TSSC4Q9Y5U2 329 aaPredicted RBP3.79□□□□□ -1.8
VPS41-205ENST00000414632 PRKDCP78527 4128 aaKnown RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 TGP01266 2768 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 SOX15O60248 233 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 RBBP9O75884 186 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 CNIH1O95406 144 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 IGHV3-11P01762 117 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 OPN1MWP04001 364 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 IGF1P05019 195 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 CRYGBP07316 175 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 CSN3P07498 182 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 SAA1P0DJI8 122 aaPredicted RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 OPN1MW2P0DN77 364 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 OPN1MW3P0DN78 364 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 IGHV4-30-4P0DP06 118 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 IGLL1P15814 213 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 RCVRNP35243 200 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 BRWD1-AS2P59051 145 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 TAS2R46P59540 309 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 TSPAN5P62079 268 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 CX3CL1P78423 397 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 SSBP2P81877 361 aaPredicted RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 PNRC1Q12796 327 aaPredicted RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 EIF4EBP1Q13541 118 aaPredicted RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 IL18Q14116 193 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 FXYD3Q14802 87 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 TNXAQ16473 311 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 MRGPRG-AS1Q2M3A8 158 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 PHLDA2Q53GA4 152 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 LBHQ53QV2 105 aaPredicted RBP3.78□□□□□ -1.8
VPS41-205ENST00000414632 C10orf55Q5SWW7 151 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 AADACL3Q5VUY0 350 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 FAAP20Q6NZ36 180 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 UNQ5815/PRO19632Q6UWF5 114 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 C19orf35Q6ZS72 473 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 PRR26Q8N8Z3 221 aa3.78□□□□□ -1.8
VPS41-205ENST00000414632 OR5T1Q8NG75 326 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms