RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 SFRP4Q6FHJ7 346 aaPredicted RBP3.26□□□□□ -1.89
LINC01048-201ENST00000414480 MRPL54Q6P161 138 aaKnown RBP3.26□□□□□ -1.89
LINC01048-201ENST00000414480 SPSB3Q6PJ21 355 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 SBSNQ6UWP8 590 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 GDPGP1Q6ZNW5 385 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 Q6ZSR6 202 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 Q6ZVH6 145 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 ZNF534Q76KX8 674 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 NEGR1Q7Z3B1 354 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 LRP11Q86VZ4 500 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 DEFB107AQ8IZN7 70 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 TMEM99Q8N816 258 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 ZDHHC22Q8N966 263 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 GPR26Q8NDV2 337 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 ZNF555Q8NEP9 628 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 OR52R1Q8NGF1 315 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 OR5AP2Q8NGF4 316 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 OR5D14Q8NGL3 314 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 NEIL3Q8TAT5 605 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 TMEM170AQ8WVE7 144 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 TSLPQ969D9 159 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 SLC25A46Q96AG3 418 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 ZNF681Q96N22 645 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 OR4C12Q96R67 309 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 GFI1Q99684 422 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 MCHR1Q99705 422 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 KIR2DL4Q99706 377 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 RARRES2Q99969 163 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 EMC6Q9BV81 110 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 SLIRPQ9GZT3 109 aaKnown RBP3.26□□□□□ -1.89
LINC01048-201ENST00000414480 CXXC4Q9H2H0 198 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 IFI27L2Q9H2X8 130 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 KCNIP2Q9NS61 270 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 SHPKQ9UHJ6 478 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 SIGLEC7Q9Y286 467 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 KLF12Q9Y4X4 402 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 RP1P56715 2156 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 DOCK9Q9BZ29 2069 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 POLEQ07864 2286 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 SCN1AP35498 2009 aa3.26□□□□□ -1.89
LINC01048-201ENST00000414480 ACANP16112 2415 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 ATRQ13535 2644 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 hCG_1818297A0A087WSY0 165 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 A0A096LPK6 155 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 KANTRA0A1W2PQU2 76 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 TCRBV3S1A0A5B6 114 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 ODAMA1E959 279 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 A8MT66 165 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 G3V2L1 256 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 CCL21O00585 134 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 SPINT2O43291 252 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 TNFSF12O43508 249 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 ZIC3O60481 467 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 IL18BPO95998 194 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 CXorf1O96002 111 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 MT-ND6P03923 174 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 PGA3P0DJD8 388 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 CXCL2P19875 107 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 DUTP33316 252 aaKnown RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 ZNF93P35789 620 aaPredicted RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 RBMXP38159 391 aaKnown RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 KIR2DS2P43631 304 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 GLIPR1P48060 266 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 PGFP49763 221 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 TAF6P49848 677 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 PGGT1BP53609 377 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 TAS2R46P59540 309 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 ANXA2RQ3ZCQ2 193 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 XAF1Q6GPH4 301 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 GUSBP11Q6P575 273 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 CNIH2Q6PI25 160 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 LCN15Q6UWW0 184 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 GLCCI1Q86VQ1 547 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 C10orf126Q8N4M7 172 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 LRTM2Q8N967 370 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 OR51G1Q8NGK1 321 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 OR1J1Q8NGS3 322 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 OR2T35Q8NGX2 323 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 SPATA3Q8NHX4 192 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 VOPP1Q96AW1 172 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 PLEKHB2Q96CS7 222 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 BMFQ96LC9 184 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 PITX2Q99697 317 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 NIPSNAP3BQ9BS92 247 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 SNRNP25Q9BV90 132 aaKnown RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 TMEM147Q9BVK8 224 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 SPANXDQ9BXN6 97 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 JPT2Q9H910 190 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 EXOSC3Q9NQT5 275 aaKnown RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 PARP11Q9NR21 331 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 CA10Q9NS85 328 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 Q9UF83 564 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 FUT9Q9Y231 359 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 ZNF443Q9Y2A4 671 aaPredicted RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 MRPS16Q9Y3D3 137 aaKnown RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 HEBP2Q9Y5Z4 205 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 CHD3Q12873 2000 aaKnown RBP3.25□□□□□ -1.89
LINC01048-201ENST00000414480 SCN8AQ9UQD0 1980 aa3.25□□□□□ -1.89
LINC01048-201ENST00000414480 RTTNQ86VV8 2226 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms