RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FRMPD3Q5JV73 1810 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 BIVM-ERCC5R4GMW8 1640 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 RGS12O14924 1447 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ATRNO75882 1429 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ANKARQ7Z5J8 1434 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 MYO5CQ9NQX4 1742 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 LRRC9Q6ZRR7 1453 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ADGRB3O60242 1522 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 TRAV8-6A0A0B4J262 113 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 TRBV7-6A0A0J9YX20 115 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 LOC100131303A0A0U1RQF7 123 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 F5H5P2 479 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 H3BRM9 83 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 M0R1X1 148 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 M0R2P5 195 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 PIRO00625 290 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 AGPAT2O15120 278 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 PLA2G10O15496 165 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 GSTZ1O43708 216 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-203ENST00000414174 NDUFS7O75251 213 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 HYPMO75409 117 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 LYZL6O75951 148 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 JTBO76095 146 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 DUSP14O95147 198 aaKnown RBP2.85□□□□□ -1.95
SF3B1-203ENST00000414174 NXPH3O95157 252 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 APOMO95445 188 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 H2AFZP0C0S5 128 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 CECR9P0C854 216 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 CRYGAP11844 174 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 SLC25A6P12236 298 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 GADD45AP24522 165 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 OPRM1P35372 400 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 POLR2IP36954 125 aaKnown RBP2.85□□□□□ -1.95
SF3B1-203ENST00000414174 FOLR3P41439 243 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 RND2P52198 227 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 FKBP1AP62942 108 aaKnown RBP2.85□□□□□ -1.95
SF3B1-203ENST00000414174 SEC11AP67812 179 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF90Q03938 601 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ATP5G2Q06055 141 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 EBI3Q14213 229 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 MSMO1Q15800 293 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF260Q3ZCT1 412 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 CENPWQ5EE01 88 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 PAPPA-AS1Q5QFB9 102 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 AADACL3Q5VUY0 350 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM236Q5W0B7 351 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF571Q7Z3V5 609 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-203ENST00000414174 C10orf111Q8N326 155 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 OR11H7Q8NGC8 314 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 OR1J4Q8NGS1 313 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 OR51H1Q8NH63 302 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 SGMS2Q8NHU3 365 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM255BQ8WV15 326 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 CCL17Q92583 94 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 MUCL1Q96DR8 90 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 SLC25A38Q96DW6 304 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 TM2D3Q9BRN9 247 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 IMUPQ9GZP8 106 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 DEFB127Q9H1M4 99 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 NAA60Q9H7X0 242 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ST20Q9HBF5 79 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ESM1Q9NQ30 184 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 OTORQ9NRC9 128 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 C21orf62Q9NYP8 219 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 FIS1Q9Y3D6 152 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 PXMP4Q9Y6I8 212 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 SBF1O95248 1867 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ABCA6Q8N139 1617 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 MYH2Q9UKX2 1941 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 MYH4Q9Y623 1939 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 CUL7Q14999 1698 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 KNDC1Q76NI1 1749 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ABCA3Q99758 1704 aa2.85□□□□□ -1.95
SF3B1-203ENST00000414174 ZSWIM8A7E2V4 1837 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 MAP2P11137 1827 aaKnown RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ECM29Q5VYK3 1845 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 IQGAP2Q13576 1575 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 RNF17Q9BXT8 1623 aaKnown RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 TRGV11A0A075B6L2 103 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 TRAV27A0A087WT01 109 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 LOC107986453A0A1B0GWG9 222 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF727A8MUV8 499 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF705FA8MVS1 300 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 FAM220BPB1ANY3 271 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 C11orf98E9PRG8 122 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 DEDDO75618 318 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 NDUFB6O95139 128 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 GYPAP02724 150 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 MT-ND6P03923 174 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF705DP0CH99 300 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF705BP0CI00 300 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ASIPP42127 132 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 VDAC2P45880 294 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 HINT1P49773 126 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 POLR2JP52435 117 aaKnown RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 HERV-K104P61576 105 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 QRFPP83859 136 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 PNOCQ13519 176 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 TGIF1Q15583 401 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms