RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TNFSF8P32971 234 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 PIGPP57054 158 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 RND3P61587 244 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 CD69Q07108 199 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 TATDN3Q17R31 274 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 KLK9Q2XQG4 91 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 IL34Q6ZMJ4 242 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 CADM3Q8N126 398 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 OR1L8Q8NGR8 309 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 B9D2Q9BPU9 175 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 SRSF8Q9BRL6 282 aaKnown RBP11.31□□□□□ -0.6
LIMS4-201ENST00000413601 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 NXF2Q9GZY0 626 aaKnown RBP11.31□□□□□ -0.6
LIMS4-201ENST00000413601 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 RABL2AQ9UBK7 228 aaPredicted RBP11.31□□□□□ -0.6
LIMS4-201ENST00000413601 KLK9Q9UKQ9 250 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 RABL2BQ9UNT1 228 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 OR51B2Q9Y5P1 312 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 DMRT1Q9Y5R6 373 aa11.31□□□□□ -0.6
LIMS4-201ENST00000413601 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 IGLV1-51P01701 117 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 HLA-AP01891 365 aaKnown RBP11.3□□□□□ -0.6
LIMS4-201ENST00000413601 SERPINE2P07093 398 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 OR13C7P0DN81 318 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 PTBP1P26599 531 aaKnown RBP eCLIP11.3□□□□□ -0.6
LIMS4-201ENST00000413601 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 MEF2DQ14814 521 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 THOC7Q6I9Y2 204 aaKnown RBP11.3□□□□□ -0.6
LIMS4-201ENST00000413601 CLEC19AQ6UXS0 136 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 OR13C8Q8NGS7 320 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 ZFAND1Q8TCF1 268 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 MARCH1Q8TCQ1 289 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 MRGPRFQ96AM1 343 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
LIMS4-201ENST00000413601 FABP12A6NFH5 140 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 MFSD2BA6NFX1 497 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 CSN3P07498 182 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 AKAIN1P0CW23 69 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 GP9P14770 177 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 FAM209BQ5JX69 171 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 GDPD1Q8N9F7 314 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 OR4C16Q8NGL9 310 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 SOSTQ9BQB4 213 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 TMEM14BQ9NUH8 114 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 FKBP11Q9NYL4 201 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 COPZ2Q9P299 210 aa11.29□□□□□ -0.6
LIMS4-201ENST00000413601 RSL24D1Q9UHA3 163 aaKnown RBP11.29□□□□□ -0.6
LIMS4-201ENST00000413601 C3orf85A0A1B0GTC6 90 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 DISC1C4P0D8 188 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 H0Y980 276 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 GSTZ1O43708 216 aaPredicted RBP11.28□□□□□ -0.6
LIMS4-201ENST00000413601 GGCTO75223 188 aaKnown RBP11.28□□□□□ -0.6
LIMS4-201ENST00000413601 OR2C1O95371 312 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 ARL3P36405 182 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 MECP2P51608 486 aaKnown RBP11.28□□□□□ -0.6
LIMS4-201ENST00000413601 SP6Q3SY56 376 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 HSD17B13Q7Z5P4 300 aaPredicted RBP11.28□□□□□ -0.6
LIMS4-201ENST00000413601 CCDC71LQ8N9Z2 235 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 OR4A16Q8NH70 328 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
LIMS4-201ENST00000413601 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 RBM38Q9H0Z9 239 aaKnown RBP11.28□□□□□ -0.6
LIMS4-201ENST00000413601 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
LIMS4-201ENST00000413601 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 ANKRD20A5PA0PJZ0 165 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 CTSDP07339 412 aaPredicted RBP11.27□□□□□ -0.61
LIMS4-201ENST00000413601 MFAP2P55001 183 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 IZUMO4Q1ZYL8 232 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 SLC25A24Q6NUK1 477 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 OR5B3Q8NH48 314 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 TMEM56Q96MV1 263 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 ZC4H2Q9NQZ6 224 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 THYN1Q9P016 225 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 COL7A1Q02388 2944 aa11.27□□□□□ -0.61
LIMS4-201ENST00000413601 CYB5BO43169 146 aa11.26□□□□□ -0.61
LIMS4-201ENST00000413601 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
LIMS4-201ENST00000413601 CLEC3BP05452 202 aa11.26□□□□□ -0.61
LIMS4-201ENST00000413601 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
LIMS4-201ENST00000413601 OR51S1Q8NGJ8 323 aa11.26□□□□□ -0.61
LIMS4-201ENST00000413601 ZNF502Q8TBZ5 544 aa11.26□□□□□ -0.61
LIMS4-201ENST00000413601 RTBDNQ9BSG5 229 aaPredicted RBP11.26□□□□□ -0.61
LIMS4-201ENST00000413601 SIGLEC8Q9NYZ4 499 aa11.26□□□□□ -0.61
LIMS4-201ENST00000413601 C14orf166Q9Y224 244 aaKnown RBP11.26□□□□□ -0.61
LIMS4-201ENST00000413601 F11RQ9Y624 299 aaKnown RBP11.26□□□□□ -0.61
LIMS4-201ENST00000413601 IZUMO1RA6ND01 250 aa11.25□□□□□ -0.61
LIMS4-201ENST00000413601 EDN2P20800 178 aa11.25□□□□□ -0.61
LIMS4-201ENST00000413601 GPR183P32249 361 aa11.25□□□□□ -0.61
LIMS4-201ENST00000413601 AKR1C2P52895 323 aa11.25□□□□□ -0.61
LIMS4-201ENST00000413601 TRIM16LQ309B1 348 aa11.25□□□□□ -0.61
LIMS4-201ENST00000413601 GPHB5Q86YW7 130 aa11.25□□□□□ -0.61
LIMS4-201ENST00000413601 PRRT1Q99946 306 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms