RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 MRPL41Q8IXM3 137 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 Q8N7P7 452 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 OR10P1Q8NGE3 313 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 OR4X1Q8NH49 305 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 PARD6GQ9BYG4 376 aaPredicted RBP12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 MAP1LC3BQ9GZQ8 125 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 TPRP12270 2363 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 XKRY2A2RUG3 117 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 RRHO14718 337 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 HBE1P02100 147 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 IRF2P14316 349 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 MBD3L1Q8WWY6 194 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 ZCCHC14Q8WYQ9 949 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 NPCDR1Q9BY65 106 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 SRD5A3Q9H8P0 318 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 SAP30LQ9HAJ7 183 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 IDI2-AS1Q9NZ38 188 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 RAXQ9Y2V3 346 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 SHISA9B4DS77 424 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 SIAH2O43255 324 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 BCL2P10415 239 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 GRNP28799 593 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 SERF2P84101 59 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 LYPD2Q6UXB3 125 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 ZNF705AQ6ZN79 300 aaPredicted RBP12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 CCL17Q92583 94 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 E7EQL1 145 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 RBX1P62877 108 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 FAM90A2PQ658T7 463 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 ABHD12Q8N2K0 398 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 OR4A16Q8NH70 328 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 GATAD1Q8WUU5 269 aa12.44□□□□□ -0.42
SCAMP4-202ENST00000409472 TRGV8A0A0C4DH27 118 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 RBFOX2O43251 390 aaKnown RBP eCLIP12.43□□□□□ -0.425e-7■■□□□ 13.9
SCAMP4-202ENST00000409472 TCF21O43680 179 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 IGKV1-16P04430 117 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 VDAC2P45880 294 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 PDLIM4P50479 330 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 OR4A47Q6IF82 309 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 OR10G4Q8NGN3 311 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 RND1Q92730 232 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 DIRC2Q96SL1 478 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 SLC25A10Q9UBX3 287 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 GAB2Q9UQC2 676 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 ITPR1Q14643 2758 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 PLAUP00749 431 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 TNFRSF1AP19438 455 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 MDKP21741 143 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 BRS3P32247 399 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 CDKN1BP46527 198 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 RAB7AP51149 207 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 RAB11AP62491 216 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 FFAR4Q5NUL3 377 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 OR4S2Q8NH73 311 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 PINX1Q96BK5 328 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 CTDSP1Q9GZU7 261 aa12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 RPUSD1Q9UJJ7 312 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-202ENST00000409472 GFRA3O60609 400 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 SCGB1D1O95968 90 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 OR10J1P30954 320 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 ERVK-16P61578 105 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 PMS2P11Q13670 270 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 CENPVQ7Z7K6 275 aaPredicted RBP12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 CTSZQ9UBR2 303 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 TCF19Q9Y242 345 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 ZFP30Q9Y2G7 519 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 TIMM9Q9Y5J7 89 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 TMEM178BH3BS89 294 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 OR5I1Q13606 314 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 CDSNQ15517 529 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 RNASE6Q93091 150 aaKnown RBP12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 LHX4Q969G2 390 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 MSRB2Q9Y3D2 182 aa12.42□□□□□ -0.42
SCAMP4-202ENST00000409472 ABCA4P78363 2273 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 PRSS46E5RG02 174 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 IL6RP08887 468 aaPredicted RBP12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 CT45A6P0DMU7 189 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 CT45A5P0DMU8 189 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 CT45A7P0DMV0 189 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 GNB2P62879 340 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 LINC00574Q9H8X3 128 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 CISD1Q9NZ45 108 aaKnown RBP12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 NKX6-3A6NJ46 265 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 FAM90A27PA6NNH2 459 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 C15orf61A6NNL5 157 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 SRRM4A7MD48 611 aaKnown RBP12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 RPL31P62899 125 aaKnown RBP12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 COL5A1-AS1Q5SY13 56 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 OR10G9Q8NGN4 311 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 OR10G7Q8NGN6 311 aa12.41□□□□□ -0.42
SCAMP4-202ENST00000409472 LINC01560Q8TB33 94 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms