RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 LOXL4Q96JB6 756 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
AFF3-202ENST00000409236 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
AFF3-202ENST00000409236 PLXNA2O75051 1894 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 DENND4AQ7Z401 1863 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 NDUFA2O43678 99 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 GFERP55789 205 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 SUMO4Q6EEV6 95 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 EDIL3O43854 480 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 RND2P52198 227 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 IRF3Q14653 427 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 PF4V1P10720 104 aa11.91□□□□□ -0.5
AFF3-202ENST00000409236 CHAC1Q9BUX1 264 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 PPIAL4EA0A075B759 164 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 IGHV3OR15-7A0A075B7D8 119 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 PPIAL4FP0DN26 164 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 IL11P20809 199 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 PPIAL4AQ9Y536 164 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 IFITM1P13164 125 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 REG1BP48304 166 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 HCP5Q6MZN7 132 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 FER1L6-AS1Q8NA97 138 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 SSC4DQ8WTU2 575 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 SIRT4Q9Y6E7 314 aaPredicted RBP11.9□□□□□ -0.5
AFF3-202ENST00000409236 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
AFF3-202ENST00000409236 SBF1O95248 1867 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 MGST3O14880 152 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 CYP2G1PQ6ZSU1 146 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 DUX3Q96PT4 197 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 SHISA8B8ZZ34 492 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 THY1P04216 161 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 LOC105371267A0A1B0GV96 52 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 SERF1AO75920 110 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 PEX11BO96011 259 aa11.9□□□□□ -0.5
AFF3-202ENST00000409236 CXorf66Q5JRM2 361 aaPredicted RBP11.9□□□□□ -0.5
AFF3-202ENST00000409236 RHOGP84095 191 aa11.9□□□□□ -0.51
AFF3-202ENST00000409236 P2RY6Q15077 328 aa11.9□□□□□ -0.51
AFF3-202ENST00000409236 SELENOHQ8IZQ5 122 aaKnown RBP11.9□□□□□ -0.51
AFF3-202ENST00000409236 OBSL1O75147 1896 aa11.9□□□□□ -0.51
AFF3-202ENST00000409236 TRAV24A0A0B4J272 114 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 SAXO1Q8IYX7 474 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 SLC25A53Q5H9E4 307 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 TMEM170AQ8WVE7 144 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 FOXA3P55318 350 aaPredicted RBP11.89□□□□□ -0.51
AFF3-202ENST00000409236 ATP5L2Q7Z4Y8 100 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 A8MXK9 166 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 LAGE3Q14657 143 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 APOBEC4Q8WW27 367 aaKnown RBP11.89□□□□□ -0.51
AFF3-202ENST00000409236 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 ASCL2Q99929 193 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 PRSS23O95084 383 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 NABP2Q9BQ15 211 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 IGLV3-27P01718 113 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 FAM19A2Q8N3H0 131 aa11.89□□□□□ -0.51
AFF3-202ENST00000409236 ATG4DQ86TL0 474 aaPredicted RBP11.89□□□□□ -0.51
AFF3-202ENST00000409236 CLEC2AQ6UVW9 174 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 MLNRO43193 412 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 GUSBP11Q6P575 273 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 SSBP3Q9BWW4 388 aaPredicted RBP11.88□□□□□ -0.51
AFF3-202ENST00000409236 GAGE12BA1L429 117 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 DEFB103AP81534 67 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 RCC1LQ96I51 464 aaKnown RBP11.88□□□□□ -0.51
AFF3-202ENST00000409236 LRRC61Q9BV99 259 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 TNFRSF12AQ9NP84 129 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 SIGLEC1Q9BZZ2 1709 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 CCL7P80098 99 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 FGFRL1Q8N441 504 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 VGLL1Q99990 258 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 DXOO77932 396 aaKnown RBP11.88□□□□□ -0.51
AFF3-202ENST00000409236 PTGDSP41222 190 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 NPIPB11E5RHQ5 1161 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 MOSP00540 346 aa11.88□□□□□ -0.51
AFF3-202ENST00000409236 KLK10O43240 276 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 DPH3P1Q9H4G8 78 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 FRMPD3Q5JV73 1810 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 C5orf66Q9H5L9 145 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 C9JCJ5 164 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 IGHV1-69-2A0A0G2JMI3 117 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 UBE2V1Q13404 147 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 TCRBV5S1A1TA0A578 114 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 F2Z2F3 143 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 CD5LO43866 347 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 GFRA3O60609 400 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 CD69Q07108 199 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 FBXW9Q5XUX1 488 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 MRPS18BQ9Y676 258 aaKnown RBP11.87□□□□□ -0.51
AFF3-202ENST00000409236 METTL12A8MUP2 240 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 RASL11AQ6T310 242 aa11.87□□□□□ -0.51
AFF3-202ENST00000409236 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
AFF3-202ENST00000409236 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
AFF3-202ENST00000409236 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
AFF3-202ENST00000409236 GATD1Q8NB37 220 aa11.86□□□□□ -0.51
AFF3-202ENST00000409236 PGLYRP1O75594 196 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms