RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 ZNF474Q6S9Z5 364 aaPredicted RBP12.51□□□□□ -0.41
LIMK2-204ENST00000406516 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
LIMK2-204ENST00000406516 F2RL2O00254 374 aa12.51□□□□□ -0.41
LIMK2-204ENST00000406516 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.412e-8■■□□□ 11.6
LIMK2-204ENST00000406516 NDUFS6O75380 124 aaKnown RBP12.51□□□□□ -0.41
LIMK2-204ENST00000406516 COL8A2P25067 703 aa12.51□□□□□ -0.41
LIMK2-204ENST00000406516 GPX4P36969 197 aaPredicted RBP12.51□□□□□ -0.41
LIMK2-204ENST00000406516 OR52E5Q8NH55 327 aa12.51□□□□□ -0.41
LIMK2-204ENST00000406516 HNF1AP20823 631 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 IL3RAP26951 378 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 LINC00469Q8N7U9 141 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 ITLN1Q8WWA0 313 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 ICE1Q9Y2F5 2266 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 A8MXE2 369 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 SOX15O60248 233 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 CR1LQ2VPA4 569 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 DUX4L9Q6RFH8 374 aaPredicted RBP12.5□□□□□ -0.41
LIMK2-204ENST00000406516 OR4S2Q8NH73 311 aa12.5□□□□□ -0.41
LIMK2-204ENST00000406516 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 STAG3L2P0CL84 134 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 GZMBP10144 247 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 KLF3P57682 345 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-204ENST00000406516 PKIAP61925 76 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 JOSD1Q15040 202 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-204ENST00000406516 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 C1orf174Q8IYL3 243 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 DDB2Q92466 427 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 JKAMPQ9P055 326 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 SAA2-SAA4A0A096LPE2 208 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 A0A0U1RQK1 487 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 F6UZH7 168 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 TSTD3H0UI37 97 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 TYMSP04818 313 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 SAA2P0DJI9 122 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-204ENST00000406516 MYOD1P15172 320 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 TMEM249Q2WGJ8 235 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 CT45A1Q5HYN5 189 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
LIMK2-204ENST00000406516 OR5R1Q8NH85 324 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 CT45A3Q8NHU0 189 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 C1orf159Q96HA4 380 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 C14orf144Q96I85 54 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 HINT2Q9BX68 163 aa12.49□□□□□ -0.41
LIMK2-204ENST00000406516 C15orf61A6NNL5 157 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 DVL1O14640 695 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 CXorf1O96002 111 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 ARSJQ5FYB0 599 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-204ENST00000406516 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 OR4A47Q6IF82 309 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 SPTBN1Q01082 2364 aaKnown RBP12.48□□□□□ -0.41
LIMK2-204ENST00000406516 FASNP49327 2511 aaKnown RBP12.48□□□□□ -0.41
LIMK2-204ENST00000406516 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-204ENST00000406516 DDTP30046 118 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 CFHR2P36980 270 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 KIR2DS2P43631 304 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 FAM27E3Q08E93 113 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 DEFB108BQ8NET1 73 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 NPVFQ9HCQ7 196 aa12.48□□□□□ -0.41
LIMK2-204ENST00000406516 NPY1RP25929 384 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 GRNP28799 593 aaKnown RBP12.47□□□□□ -0.41
LIMK2-204ENST00000406516 RAB7AP51149 207 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 LYG1Q8N1E2 194 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 SLC24A4Q8NFF2 622 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 RNASEH2CQ8TDP1 164 aaKnown RBP12.47□□□□□ -0.41
LIMK2-204ENST00000406516 SFRP2Q96HF1 295 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
LIMK2-204ENST00000406516 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
LIMK2-204ENST00000406516 DSCAMO60469 2012 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 CD99P14209 185 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 GNG10P50151 68 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 LCN2P80188 198 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 STPG3Q8N7X2 389 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 SGMS2Q8NHU3 365 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 WFIKKN1Q96NZ8 548 aa12.47□□□□□ -0.41
LIMK2-204ENST00000406516 LSM4Q9Y4Z0 139 aaKnown RBP12.47□□□□□ -0.41
LIMK2-204ENST00000406516 GCN1Q92616 2671 aaKnown RBP12.47□□□□□ -0.41
LIMK2-204ENST00000406516 A0A087X0M5 115 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 A0A1B0GX30 115 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 ZNF705GA8MUZ8 300 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-204ENST00000406516 LHBP01229 141 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 CGB3P0DN86 165 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 CGB7P0DN87 165 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 PDLIM4P50479 330 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 ENY2Q9NPA8 101 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 LRRK2Q5S007 2527 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 KBTBD11-OT1A0A1B0GTJ5 212 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 CA2P00918 260 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 GLRXP35754 106 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 CNN1P51911 297 aaKnown RBP12.46□□□□□ -0.41
LIMK2-204ENST00000406516 EFNB3Q15768 340 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 TEPPQ6URK8 271 aa12.46□□□□□ -0.41
LIMK2-204ENST00000406516 TMEM144Q7Z5S9 345 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms