RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 BHLHA15Q7RTS1 189 aaPredicted RBP12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 RNASE7Q9H1E1 156 aaKnown RBP12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 DENND4AQ7Z401 1863 aa12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 PINLYPA6NC86 204 aa12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 J3QR06 171 aa12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 GCSHP23434 173 aa12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 IL15RAQ13261 267 aa12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 HSPB7Q9UBY9 170 aa12.3□□□□□ -0.44
RPRD1A-202ENST00000399022 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 GZMHP20718 246 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 CHD3Q12873 2000 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 NMSQ5H8A3 153 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 VKORC1L1Q8N0U8 176 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 CSRP1P21291 193 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 C20orf144Q9BQM9 153 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 PAXXQ9BUH6 204 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 PPIAL4DF5H284 164 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 FOXL1Q12952 345 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 C10orf113Q5VZT2 155 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 STPG3Q8N7X2 389 aa12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
RPRD1A-202ENST00000399022 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 CDKN1AP38936 164 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 PMCHL2Q9BQD1 86 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 ELOVL5Q9NYP7 299 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 LOXL4Q96JB6 756 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 AMMECR1Q9Y4X0 333 aaPredicted RBP12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 F11RQ9Y624 299 aaKnown RBP12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 MED13LQ71F56 2210 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 RIGQ13278 110 aa12.28□□□□□ -0.44
RPRD1A-202ENST00000399022 A0A1W2PN81 502 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 ZNF716A6NP11 495 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 TMEM50AO95807 157 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 TIMP3P35625 211 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 TRAV9-1A0A075B6T8 112 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 C9orf172C9J069 976 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 ADH4P08319 380 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 FTH1P19P0C7X4 201 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 ACP1P24666 158 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 ORAOV1Q8WV07 137 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 NABP2Q9BQ15 211 aa12.27□□□□□ -0.44
RPRD1A-202ENST00000399022 WNK2Q9Y3S1 2297 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 TNFRSF1AP19438 455 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 KIR2DS2P43631 304 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 ARF6P62330 175 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 ZNF841Q6ZN19 808 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 ABCA4P78363 2273 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 C17orf98A8MV24 154 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 WNT9BO14905 357 aa12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 C1orf147Q96MC9 270 aaPredicted RBP12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 FNDC4Q9H6D8 234 aaPredicted RBP12.27□□□□□ -0.45
RPRD1A-202ENST00000399022 ABCA1O95477 2261 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 IL6RP08887 468 aaPredicted RBP12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 C3orf79P0CE67 100 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 RNF166Q96A37 237 aaPredicted RBP12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 NABP1Q96AH0 204 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 A0A1B0GV72 72 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 RBP4P02753 201 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 NUDT10Q8NFP7 164 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 KLF14Q8TD94 323 aaPredicted RBP12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 KIAA1671Q9BY89 1806 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 IFNL4K9M1U5 179 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 PRDX2P32119 198 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 GAGE1Q13065 139 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 SAXO1Q8IYX7 474 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 FDCSPQ8NFU4 85 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 EAF1Q96JC9 268 aaPredicted RBP12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 LIME1Q9H400 295 aa12.26□□□□□ -0.45
RPRD1A-202ENST00000399022 H3BUT2 72 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 GNG7O60262 68 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 LILRA1O75019 489 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 C5orf17Q8NAS9 161 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 GUCD1Q96NT3 240 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 AGMATQ9BSE5 352 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 MS4A5Q9H3V2 200 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 PNRC2Q9NPJ4 139 aaKnown RBP12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 IGKV1-27A0A075B6S5 117 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 PGPA6NDG6 321 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 C8orf88P0DMB2 117 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 CCL8P80075 99 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 TMEM108Q6UXF1 575 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 PRNDQ9UKY0 176 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 E9PLN8 166 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 TSPOP30536 169 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 MPV17L2Q567V2 206 aa12.25□□□□□ -0.45
RPRD1A-202ENST00000399022 CLEC5AQ9NY25 188 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms