RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 MAP1LC3CQ9BXW4 147 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 PRO3102Q9H379 93 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 LTBP2Q14767 1821 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 LOC102724200A0A096LPH7 203 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 NPIPB11E5RHQ5 1161 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 C17orf82Q86X59 251 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 PHLDA3Q9Y5J5 127 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 MPDU1O75352 247 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 GPX1P07203 203 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 NMUP48645 174 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 HIST1H1AQ02539 215 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 ATP5G2Q06055 141 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 ZNF345Q14585 488 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 STPG3Q8N7X2 389 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 SELENOKQ9Y6D0 94 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 WDR87Q6ZQQ6 2873 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 IGF2RP11717 2491 aa9.74□□□□□ -0.85
PCDHGA8-201ENST00000398604 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 CA2P00918 260 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 TRGC2P03986 189 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 PRSS2P07478 247 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 ZFP36L1Q07352 338 aaKnown RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 KLHDC3Q9BQ90 382 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 ELOVL5Q9NYP7 299 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 LINC00527Q9UJ94 153 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 DOCK11Q5JSL3 2073 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 C17orf100A8MU93 164 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 LHX2P50458 406 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 AMMECR1LQ6DCA0 310 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 OR1N2Q8NGR9 330 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 WFIKKN1Q96NZ8 548 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 RPRMQ9NS64 109 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 NPIPB13A6NJU9 1138 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 FOXI3A8MTJ6 420 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 NPIPB4C9JG80 1138 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 CLDN18P56856 261 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 PUSL1Q8N0Z8 303 aaKnown RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 WBP1Q96G27 269 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 DMRTA2Q96SC8 542 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 RSPO3Q9BXY4 272 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 LYRM2Q9NU23 88 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 ZNF319Q9P2F9 582 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 PLXNB3Q9ULL4 1909 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 SETD2Q9BYW2 2564 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 IGLV3-12A0A075B6K2 115 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 A0A1B0GTI1 187 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 MPTX1A8MV57 137 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 H7C2G1 150 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 SAXO1Q8IYX7 474 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 FGFBP3Q8TAT2 258 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 DPH3Q96FX2 82 aa9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 ZMAT5Q9UDW3 170 aaKnown RBP9.73□□□□□ -0.85
PCDHGA8-201ENST00000398604 C5orf42Q9H799 3197 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 PRR32B1ATL7 298 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 B4DEV8 164 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 RND3P61587 244 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 PLAURQ03405 335 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 SCN8AQ9UQD0 1980 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 TLN2Q9Y4G6 2542 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 J3QRE1 110 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 GPR183P32249 361 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 ICAM4Q14773 271 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 EIF4E3Q8N5X7 224 aaKnown RBP9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 YAE1D1Q9NRH1 226 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 LOC390937A0A1W2PQ73 354 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 TMEM187Q14656 261 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 IFT22Q9H7X7 185 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 FOXA2Q9Y261 457 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 TCF20Q9UGU0 1960 aaKnown RBP9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 HIVEP2P31629 2446 aa9.72□□□□□ -0.85
PCDHGA8-201ENST00000398604 CX3CL1P78423 397 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 FLVCR1-AS1Q8TAF5 88 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 DUX5Q96PT3 197 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 SEMA5BQ9P283 1151 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 FOXD3Q9UJU5 478 aaPredicted RBP9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 A0A087X0M5 115 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 A0A1B0GX30 115 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 IFNL4K9M1U5 179 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 LYPD3O95274 346 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 SELLP14151 372 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 GCSHP23434 173 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 BET1LQ9NYM9 111 aa9.71□□□□□ -0.85
PCDHGA8-201ENST00000398604 HERVK_113P61574 105 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 COX19Q49B96 90 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 FADS6Q8N9I5 356 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 MARVELD3Q96A59 401 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 TMEM45BQ96B21 275 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 FBXL7Q9UJT9 491 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 EMP1P54849 157 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 FOXA3P55318 350 aaPredicted RBP9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 KIR3DL3Q8N743 410 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 NUP37Q8NFH4 326 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 GP6Q9HCN6 339 aa9.71□□□□□ -0.86
PCDHGA8-201ENST00000398604 IFITM10A6NMD0 228 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms