RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CBX3Q13185 183 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 ZNF343Q6P1L6 599 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 ZNF383Q8NA42 475 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 TCTEX1D2Q8WW35 142 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 COPZ2Q9P299 210 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 PEF1Q9UBV8 284 aaKnown RBP12.16□□□□□ -0.46
CUX2-202ENST00000397643 GPR132Q9UNW8 380 aa12.16□□□□□ -0.46
CUX2-202ENST00000397643 FAM240BA0A1B0GVZ2 78 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 OR2A4O95047 310 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 NDUFB6O95139 128 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 CD7P09564 240 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 RRASP10301 218 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 PI3P19957 117 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 BTCP35070 178 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 CD81P60033 236 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 RND3P61587 244 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 EIF4EBP1Q13541 118 aaPredicted RBP12.15□□□□□ -0.46
CUX2-202ENST00000397643 RTL8BQ17RB0 113 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 OR2K2Q8NGT1 345 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.46
CUX2-202ENST00000397643 NEURL2Q9BR09 285 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 SLC2A9Q9NRM0 540 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 SLC35D1Q9NTN3 355 aa12.15□□□□□ -0.46
CUX2-202ENST00000397643 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 SLC25A17O43808 307 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 RLN1P04808 185 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 KIR2DS2P43631 304 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 PIGPP57054 158 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 RPL30P62888 115 aaKnown RBP12.14□□□□□ -0.47
CUX2-202ENST00000397643 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 CD300EQ496F6 205 aaPredicted RBP12.14□□□□□ -0.47
CUX2-202ENST00000397643 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 PDPNQ86YL7 162 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 OR51H1Q8NH63 302 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 ENKURQ8TC29 256 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 RTBDNQ9BSG5 229 aaPredicted RBP12.14□□□□□ -0.47
CUX2-202ENST00000397643 C5orf66Q9H5L9 145 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 PCLOQ9Y6V0 5065 aa12.14□□□□□ -0.47
CUX2-202ENST00000397643 LINC00473A8K010 186 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 MPPED1O15442 326 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 FCGR3BO75015 233 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 LY6G6CO95867 125 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 IGLV2-23P01705 113 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 CRYGBP07316 175 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 RPEL1Q2QD12 228 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 CD300LFQ8TDQ1 290 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 DDB2Q92466 427 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
CUX2-202ENST00000397643 TEX13DA0A0J9YY54 714 aaPredicted RBP12.12□□□□□ -0.47
CUX2-202ENST00000397643 TCRBP04435 133 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 F2RP25116 425 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 TAS2R31P59538 309 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
CUX2-202ENST00000397643 OR2B11Q5JQS5 317 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 TMED4Q7Z7H5 227 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 SPAG16Q8N0X2 631 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 CENPSQ8N2Z9 138 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 OR4S2Q8NH73 311 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 SRD5A3Q9H8P0 318 aa12.12□□□□□ -0.47
CUX2-202ENST00000397643 BMPR1BO00238 502 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 RBFOX2O43251 390 aaKnown RBP eCLIP12.11□□□□□ -0.47
CUX2-202ENST00000397643 B3GALNT1O75752 331 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 AKR1C4P17516 323 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 TATDN3Q17R31 274 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 MRGPRG-AS1Q2M3A8 158 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
CUX2-202ENST00000397643 USMG5Q96IX5 58 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 TMEM68Q96MH6 324 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 NAA60Q9H7X0 242 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 PEMTQ9UBM1 199 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 KCNIP3Q9Y2W7 256 aa12.11□□□□□ -0.47
CUX2-202ENST00000397643 C3orf85A0A1B0GTC6 90 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 CRYM-AS1A6NIL9 109 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 OR11H12B2RN74 326 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 CNIH1O95406 144 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 CRYZL1O95825 349 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 EDN2P20800 178 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 LGALS7P47929 136 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 C20orf85Q9H1P6 137 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 ZC4H2Q9NQZ6 224 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 FAM212BQ9NTI7 297 aaPredicted RBP12.1□□□□□ -0.47
CUX2-202ENST00000397643 FLVCR2Q9UPI3 526 aa12.1□□□□□ -0.47
CUX2-202ENST00000397643 SHOXO15266 292 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 PTTG1O95997 202 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 SERPINE2P07093 398 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 H2AFB2P0C5Z0 115 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 ANXA3P12429 323 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 UBE2MP61081 183 aaKnown RBP12.09□□□□□ -0.47
CUX2-202ENST00000397643 DEFB114Q30KQ6 69 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 TMEM128Q5BJH2 165 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 PLET1Q6UQ28 207 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 SLC25A42Q86VD7 318 aa12.09□□□□□ -0.47
CUX2-202ENST00000397643 OSR1Q8TAX0 266 aaPredicted RBP12.09□□□□□ -0.47
CUX2-202ENST00000397643 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms