RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 INSIG2Q9Y5U4 225 aa13.14□□□□□ -0.31
SNX6-202ENST00000396526 MALRD1Q5VYJ5 2156 aa13.13□□□□□ -0.31
SNX6-202ENST00000396526 B2MP61769 119 aa13.13□□□□□ -0.31
SNX6-202ENST00000396526 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
SNX6-202ENST00000396526 ST6GALNAC6Q969X2 333 aa13.13□□□□□ -0.31
SNX6-202ENST00000396526 C1orf196B1AJZ1 125 aa13.13□□□□□ -0.31
SNX6-202ENST00000396526 TMEM250H0YL14 139 aa13.13□□□□□ -0.31
SNX6-202ENST00000396526 NDUFS6O75380 124 aaKnown RBP13.13□□□□□ -0.31
SNX6-202ENST00000396526 ATMQ13315 3056 aa13.13□□□□□ -0.31
SNX6-202ENST00000396526 A0A087WWC5 75 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 SEC14L6B5MCN3 397 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 WDR25Q64LD2 544 aaPredicted RBP13.12□□□□□ -0.31
SNX6-202ENST00000396526 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 GGTLC1Q9BX51 225 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 SIRT7Q9NRC8 400 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 ATRXP46100 2492 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 RHOBP62745 196 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 RNF212Q495C1 297 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 RPEQ96AT9 228 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 IGHV2-26A0A0B4J1V2 119 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 COLCA2A8K830 154 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 PRSS46E5RG02 174 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 OR4F5Q8NH21 305 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 OR4F4Q96R69 305 aa13.12□□□□□ -0.31
SNX6-202ENST00000396526 CRYBA1P05813 215 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 TMEM249Q2WGJ8 235 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 HLA-DRB5Q30154 266 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 TMEM144Q7Z5S9 345 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 MOB3BQ86TA1 216 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 BEND2Q8NDZ0 799 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 CACNG8Q8WXS5 425 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 MGST2Q99735 147 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 SMIM7Q9BQ49 75 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 TXNDC17Q9BRA2 123 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 RPL29P47914 159 aaKnown RBP13.11□□□□□ -0.31
SNX6-202ENST00000396526 CDSNQ15517 529 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 PATZ1Q9HBE1 687 aaKnown RBP13.11□□□□□ -0.31
SNX6-202ENST00000396526 ONECUT1Q9UBC0 465 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 NCOR2Q9Y618 2525 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 ZNF841Q6ZN19 808 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 SSMEM1Q8WWF3 244 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 NDUFA4L2Q9NRX3 87 aa13.11□□□□□ -0.31
SNX6-202ENST00000396526 LSM4Q9Y4Z0 139 aaKnown RBP13.11□□□□□ -0.31
SNX6-202ENST00000396526 SPTBN1Q01082 2364 aaKnown RBP13.1□□□□□ -0.31
SNX6-202ENST00000396526 TMEM8BA6NDV4 472 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 CXorf1O96002 111 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 MYOD1P15172 320 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 MMD2Q8IY49 270 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 TMEM170AQ8WVE7 144 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 CHODLQ9H9P2 273 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 COX7A1P24310 79 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
SNX6-202ENST00000396526 FAM90A2PQ658T7 463 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 TEX45Q8NA69 505 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 C8orf46Q8TAG6 207 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 ISOC2Q96AB3 205 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 TMPRSS5Q9H3S3 457 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 NAT8Q9UHE5 227 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 LAMA5O15230 3695 aa13.1□□□□□ -0.31
SNX6-202ENST00000396526 INS-IGF2F8WCM5 200 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 SLC25A17O43808 307 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 PAGE4O60829 102 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 AGAP20933 346 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 GPX4P36969 197 aaPredicted RBP13.09□□□□□ -0.31
SNX6-202ENST00000396526 TMEM241Q24JQ0 296 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 HIST1H2BAQ96A08 127 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 EIF3GO75821 320 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNX6-202ENST00000396526 CST9LP1Q5W188 147 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 BIN3Q9NQY0 253 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 TNCP24821 2201 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 TSPAN9O75954 239 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
SNX6-202ENST00000396526 BUB1B-PAK6H3BSN5 160 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 PDE6DO43924 150 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 S100A6P06703 90 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 RNASE2P10153 161 aaKnown RBP13.08□□□□□ -0.32
SNX6-202ENST00000396526 FOLR2P14207 255 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 CEACAM3P40198 252 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
SNX6-202ENST00000396526 C19orf24Q9BVV8 132 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 C11orf94C9JXX5 98 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 IGLV1-47P01700 117 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 DIAPH2-AS1Q14236 149 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 DTX2Q86UW9 622 aa13.08□□□□□ -0.32
SNX6-202ENST00000396526 RNASEH2CQ8TDP1 164 aaKnown RBP13.08□□□□□ -0.32
SNX6-202ENST00000396526 CD69Q07108 199 aa13.07□□□□□ -0.32
SNX6-202ENST00000396526 ZNF430Q9H8G1 570 aaPredicted RBP13.07□□□□□ -0.32
SNX6-202ENST00000396526 SDF2L1Q9HCN8 221 aa13.07□□□□□ -0.32
SNX6-202ENST00000396526 LOC105371242A0A075B767 164 aa13.07□□□□□ -0.32
SNX6-202ENST00000396526 IGHV3-72A0A0B4J1Y9 119 aa13.07□□□□□ -0.32
SNX6-202ENST00000396526 SOD3P08294 240 aa13.07□□□□□ -0.32
SNX6-202ENST00000396526 RAB5AP20339 215 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms