RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
VAMP1-202ENST00000396308 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
VAMP1-202ENST00000396308 ARL6Q9H0F7 186 aa12.3□□□□□ -0.44
VAMP1-202ENST00000396308 MDFIC2A0A1B0GVS7 189 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 H3BP45 60 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 OR8U8P0C7N1 319 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
VAMP1-202ENST00000396308 ATP5IP56385 69 aaPredicted RBP12.29□□□□□ -0.44
VAMP1-202ENST00000396308 RAB11AP62491 216 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 HBG1P69891 147 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 HBG2P69892 147 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 LY6EQ16553 131 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 IL17RELQ6ZVW7 336 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 TMEM219Q86XT9 240 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 BCL6BQ8N143 479 aaPredicted RBP12.29□□□□□ -0.44
VAMP1-202ENST00000396308 C9orf62Q8N4C0 152 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 SRSF12Q8WXF0 261 aaKnown RBP12.29□□□□□ -0.44
VAMP1-202ENST00000396308 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
VAMP1-202ENST00000396308 NDUFA4L2Q9NRX3 87 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 U3KQ87 197 aa12.29□□□□□ -0.44
VAMP1-202ENST00000396308 A6NDX4 124 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 HLA-DRB1P01911 266 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 S100A11P31949 105 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 HTR2BP41595 481 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 EWSR1Q01844 656 aaKnown RBP eCLIP12.28□□□□□ -0.44
VAMP1-202ENST00000396308 PJVKQ0ZLH3 352 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 FXYD3Q14802 87 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 CLEC9AQ6UXN8 241 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 Q6YL49 198 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 KCNRGQ8N5I3 272 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 Q8N9W7 124 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 SLC24A4Q8NFF2 622 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 PLSCR3Q9NRY6 295 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 F8P00451 2351 aa12.28□□□□□ -0.44
VAMP1-202ENST00000396308 RNF222A6NCQ9 220 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 FAM24AA6NFZ4 105 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 TAAR5O14804 337 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 CYB5BO43169 146 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 IGHV4-59P01825 116 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 HKR1P10072 659 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 NPY1RP25929 384 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 IER3P46695 156 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 SULT1A1P50225 295 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.45
VAMP1-202ENST00000396308 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 ZNF562Q6V9R5 426 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 TMUB2Q71RG4 321 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 LILRB2Q8N423 598 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 TMEM252Q8N6L7 170 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 C5orf56Q8N8D9 126 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 ARPC5LQ9BPX5 153 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 C11orf1Q9H5F2 150 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
VAMP1-202ENST00000396308 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 FLNAP21333 2647 aaKnown RBP12.27□□□□□ -0.45
VAMP1-202ENST00000396308 CELSR1Q9NYQ6 3014 aa12.27□□□□□ -0.45
VAMP1-202ENST00000396308 INS-IGF2F8WCM5 200 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 KCNAB3O43448 404 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 BCL2L11O43521 198 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 TSPAN9O75954 239 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 LY6G6DO95868 133 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 MYOD1P15172 320 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 SRD5A1P18405 259 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 CXCL2P19875 107 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
VAMP1-202ENST00000396308 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
VAMP1-202ENST00000396308 LGALSLQ3ZCW2 172 aaPredicted RBP12.26□□□□□ -0.45
VAMP1-202ENST00000396308 OR1S2Q8NGQ3 325 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 PIFOQ8TCI5 191 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 PINX1Q96BK5 328 aaKnown RBP12.26□□□□□ -0.45
VAMP1-202ENST00000396308 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
VAMP1-202ENST00000396308 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 MSGN1A6NI15 193 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 DFFBO76075 338 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 TMEM50AO95807 157 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 IFNA4P05014 189 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 METTL15P1P0C7V9 234 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 OR13C7P0DN81 318 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 PAX9P55771 341 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 CX3CL1P78423 397 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 OPCMLQ14982 345 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 SIGLECL1Q8N7X8 197 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 OR10P1Q8NGE3 313 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 PRDM13Q9H4Q3 707 aa12.25□□□□□ -0.45
VAMP1-202ENST00000396308 FCN1O00602 326 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 HOXA3O43365 443 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-202ENST00000396308 CST7O76096 145 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 ZNF266Q14584 549 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 MRGPRG-AS1Q2M3A8 158 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 FBLN7Q53RD9 439 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 ARSJQ5FYB0 599 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-202ENST00000396308 C9orf152Q5JTZ5 239 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 OR8G2PQ6IF36 304 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 SLC25A24Q6NUK1 477 aa12.24□□□□□ -0.45
VAMP1-202ENST00000396308 TMEM14EPQ6UXP3 125 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms