RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 WASHC3Q9Y3C0 194 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 DMXL1Q9Y485 3027 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 LINC00473A8K010 186 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 RAB29O14966 203 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 RBFOX2O43251 390 aaKnown RBP eCLIP11.04□□□□□ -0.64
NFKB1-202ENST00000394820 COX7A2P2O60397 106 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 UCP2P55851 309 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 RELBQ01201 579 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 KRTCAP3Q53RY4 240 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 MOB1BQ7L9L4 216 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 ZNF645Q8N7E2 425 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 POM121L2Q96KW2 1035 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 OPN3Q9H1Y3 402 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-202ENST00000394820 ZNRD1Q9P1U0 126 aa11.04□□□□□ -0.64
NFKB1-202ENST00000394820 CD24P25063 80 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 MRPS11P82912 194 aaKnown RBP11.03□□□□□ -0.64
NFKB1-202ENST00000394820 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 MBD3L1Q8WWY6 194 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 TMEM208Q9BTX3 173 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 TMEM106BQ9NUM4 274 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 CEP295Q9C0D2 2601 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 FBLL1A6NHQ2 334 aaKnown RBP11.03□□□□□ -0.64
NFKB1-202ENST00000394820 M0QZ24 198 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 PRDX2P32119 198 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 BRS3P32247 399 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 STPG3Q8N7X2 389 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 ADAMTS20P59510 1910 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 COL5A1P20908 1838 aaPredicted RBP11.03□□□□□ -0.64
NFKB1-202ENST00000394820 CXorf1O96002 111 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 HCP5Q6MZN7 132 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 SSX8Q7RTT4 187 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 LSM10Q969L4 123 aaKnown RBP11.03□□□□□ -0.64
NFKB1-202ENST00000394820 ASCL2Q99929 193 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 SPRR3Q9UBC9 169 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 DYSFO75923 2080 aa11.03□□□□□ -0.64
NFKB1-202ENST00000394820 J3QR06 171 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 TMPRSS2O15393 492 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 SLC25A5P05141 298 aaKnown RBP11.02□□□□□ -0.64
NFKB1-202ENST00000394820 SRP14P37108 136 aaKnown RBP11.02□□□□□ -0.64
NFKB1-202ENST00000394820 UQCRFS1P47985 274 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 CCL8P80075 99 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 COL5A1-AS1Q5SY13 56 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 UNQ5815/PRO19632Q6UWF5 114 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 GBGT1Q8N5D6 347 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 TCF19Q9Y242 345 aa11.02□□□□□ -0.64
NFKB1-202ENST00000394820 C21orf140B9A014 251 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 TMEM42Q69YG0 159 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 TMEM178AQ8NBL3 297 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 OR2T6Q8NHC8 308 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 SLC35E1Q96K37 410 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 CHEK1O14757 476 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 GCHFRP30047 84 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 RNPS1Q15287 305 aaKnown RBP11.02□□□□□ -0.65
NFKB1-202ENST00000394820 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
NFKB1-202ENST00000394820 OR5R1Q8NH85 324 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.65
NFKB1-202ENST00000394820 ODF3L1Q8IXM7 274 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 Q8IYB0 196 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 FDCSPQ8NFU4 85 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 OR1B1Q8NGR6 318 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 RNF2Q99496 336 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 CCL13Q99616 98 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 NPVFQ9HCQ7 196 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 CUL9Q8IWT3 2517 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 IL18BPO95998 194 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 APCSP02743 223 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 PEAR1Q5VY43 1037 aaPredicted RBP11.01□□□□□ -0.65
NFKB1-202ENST00000394820 OR8G5Q8NG78 346 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 IL36GQ9NZH8 169 aa11.01□□□□□ -0.65
NFKB1-202ENST00000394820 SMG1Q96Q15 3661 aaKnown RBP11.01□□□□□ -0.65
NFKB1-202ENST00000394820 TRAV5A0A0B4J249 113 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 BMPR1BO00238 502 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 CA2P00918 260 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 IL6RP08887 468 aaPredicted RBP11□□□□□ -0.65
NFKB1-202ENST00000394820 NRN1Q9NPD7 142 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 RALYQ9UKM9 306 aaKnown RBP11□□□□□ -0.65
NFKB1-202ENST00000394820 WIPI2Q9Y4P8 454 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 NAV3Q8IVL0 2385 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 ATRXP46100 2492 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 LMO1P25800 156 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 OR10X1Q8NGY0 326 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 CCL17Q92583 94 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 NAA38Q9BRA0 125 aaKnown RBP11□□□□□ -0.65
NFKB1-202ENST00000394820 MAJINQ3KP22 176 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 DECR2Q9NUI1 292 aa11□□□□□ -0.65
NFKB1-202ENST00000394820 NPPCP23582 126 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 RND2P52198 227 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 ACSF3Q4G176 576 aaPredicted RBP10.99□□□□□ -0.65
NFKB1-202ENST00000394820 VWA1Q6PCB0 445 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 NEU1Q99519 415 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 GNB4Q9HAV0 340 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 CLEC5AQ9NY25 188 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 FOXF2Q12947 444 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 OR8B2Q96RD0 313 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 C2orf88Q9BSF0 95 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 BET1LQ9NYM9 111 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 ADGRG4Q8IZF6 3080 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 LOC389332A0A1B0GUA5 103 aa10.99□□□□□ -0.65
NFKB1-202ENST00000394820 DPRXA6NFQ7 191 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms