RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RNFT1Q5M7Z0 435 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 PRAMEF6Q5VXH4 476 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 IGF2-ASQ6U949 168 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 OR2K2Q8NGT1 345 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 OR4S2Q8NH73 311 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 MSI2Q96DH6 328 aaKnown RBP4.8□□□□□ -1.64
RFFL-202ENST00000394597 TMEM70Q9BUB7 260 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 JKAMPQ9P055 326 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 OR51B2Q9Y5P1 312 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 HEATR1Q9H583 2144 aaKnown RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 TRBV9A0A0B4J1U6 114 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 A0A1W2PNU3 283 aaPredicted RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 OR2T8A6NH00 312 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 C1QTNF9BB2RNN3 333 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 C3orf80F5H4A9 247 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 C1QTNF9P0C862 333 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 CRYGSP22914 178 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 FAM27E3Q08E93 113 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 LRRC10Q5BKY1 277 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 FOXL2NBQ6ZUU3 175 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 UBALD1Q8TB05 177 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 LYZL4Q96KX0 146 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 FAM234AQ9H0X4 552 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 PLSCR4Q9NRQ2 329 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 SYNGR1O43759 233 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 FOXG1P55316 489 aaPredicted RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 IZUMO4Q1ZYL8 232 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 SPINK9Q5DT21 86 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 PRAMEF5Q5TYX0 476 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 LCN12Q6JVE5 192 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 ZNF841Q6ZN19 808 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 C1QL2Q7Z5L3 287 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 PRSS3P2Q8NHM4 247 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 LYPD6BQ8NI32 183 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 RFESDQ8TAC1 157 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 OR5P3Q8WZ94 311 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 Q96M66 194 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 S1PR3Q99500 378 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 MRPS16Q9Y3D3 137 aaKnown RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 TRAV38-1A0A0B4J264 116 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 PGPEP1LA6NFU8 196 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 CNIH1O95406 144 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 CECR9P0C854 216 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 TAS2R45P59539 299 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 FXYD3Q14802 87 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 PLGLAQ15195 96 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 Q6ZWC4 215 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 C5orf24Q7Z6I8 188 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 LINC01551Q86U37 167 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 BLNKQ8WV28 456 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 NAA38Q9BRA0 125 aaKnown RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 RAB1BQ9H0U4 201 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 PNRC2Q9NPJ4 139 aaKnown RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.79□□□□□ -1.64
RFFL-202ENST00000394597 PXMP4Q9Y6I8 212 aa4.79□□□□□ -1.64
RFFL-202ENST00000394597 MYO18BQ8IUG5 2567 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 IGHV2-70DA0A0C4DH43 119 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 FAM157AC9JC47 383 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 ENSAO43768 121 aaKnown RBP4.78□□□□□ -1.64
RFFL-202ENST00000394597 GOSR1O95249 250 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 CA1P00915 261 aaPredicted RBP4.78□□□□□ -1.64
RFFL-202ENST00000394597 HLA-DRB1P01911 266 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 PSG2P11465 335 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 GZMHP20718 246 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 TIMP3P35625 211 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 GLRXP35754 106 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 KIR2DL2P43627 348 aaPredicted RBP4.78□□□□□ -1.64
RFFL-202ENST00000394597 RHOBP62745 196 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 COA6Q5JTJ3 125 aaKnown RBP4.78□□□□□ -1.64
RFFL-202ENST00000394597 FAM166AQ6J272 317 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 IGFL3Q6UXB1 125 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 SELENOHQ8IZQ5 122 aaKnown RBP4.78□□□□□ -1.64
RFFL-202ENST00000394597 OR10AG1Q8NH19 301 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 DPF1Q92782 380 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 IL36BQ9NZH7 164 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 OOEPA6NGQ2 149 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 LILRA1O75019 489 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 ADH4P08319 380 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 C3orf79P0CE67 100 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 GCSHP23434 173 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 PRDX2P32119 198 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 CSN1S1P47710 185 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 NMUP48645 174 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 FOXF2Q12947 444 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 IGFBP7Q16270 282 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 TEX43Q6ZNM6 134 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 ZNF788Q6ZQV5 615 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 LHFPL1Q86WI0 220 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 FER1L6-AS1Q8NA97 138 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 ZNF48Q96MX3 618 aaPredicted RBP4.78□□□□□ -1.64
RFFL-202ENST00000394597 VSIRQ9H7M9 311 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 FBLN5Q9UBX5 448 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 TRAV1-1A0A0B4J248 108 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 IGKV1-9A0A0C4DH69 117 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 MUC21A0A0G2JKD1 596 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 MUC21A0A140T8X8 626 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 hADV38S2A0JD32 116 aa4.78□□□□□ -1.64
RFFL-202ENST00000394597 GPR183P32249 361 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms