RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 CEP250Q9BV73 2442 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 SPAARA0A1B0GVQ0 90 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 RAB7AP51149 207 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 TAS2R60P59551 318 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 RAB31Q13636 194 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 PSG5Q15238 335 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 SNRNP40Q96DI7 357 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 TXNDC17Q9BRA2 123 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 MMP23AO75900 390 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 CMTM2Q8TAZ6 248 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 BTF3L4Q96K17 158 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 CCL13Q99616 98 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 CBLN4Q9NTU7 201 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 TMEM14BQ9NUH8 114 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 KBTBD11-OT1A0A1B0GTJ5 212 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 A0A1B0GWJ7 208 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 CGB3P0DN86 165 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 CGB7P0DN87 165 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 MLANAQ16655 118 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 DEFB124Q8NES8 71 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 UHRF2Q96PU4 802 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 ROS1P08922 2347 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 CRYBB3P26998 211 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 IER3P46695 156 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 TGIF2LXQ8IUE1 241 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 OR1L6Q8NGR2 347 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 MRPL18Q9H0U6 180 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 IL36BQ9NZH7 164 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 NAGKQ9UJ70 344 aa11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 FOXA2Q9Y261 457 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 POLR3KQ9Y2Y1 108 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-205ENST00000394084 TRGV10A0A0A0MS01 117 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 J3QR06 171 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 MT-CO2P00403 227 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 IGKV1-16P04430 117 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 KRTCAP3Q53RY4 240 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 ZNF474Q6S9Z5 364 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 RND1Q92730 232 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 C2orf88Q9BSF0 95 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 DCAF16Q9NXF7 216 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 TP53TG3Q9ULZ0 132 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 ARFGEF3Q5TH69 2177 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 F2Z2F3 143 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 LHBP01229 141 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 LINC00869P0C866 280 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 SSTP61278 116 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 ZCCHC14Q8WYQ9 949 aaKnown RBP11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 NABP2Q9BQ15 211 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 PLEKHA3Q9HB20 300 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 OR10J4P0C629 311 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 CFHR2P36980 270 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 YPEL3P61236 119 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 PRR20EP86478 221 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 PRR20CP86479 221 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 PRR20DP86480 221 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 PRR20BP86481 221 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 PRR20AP86496 221 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 DOLPP1Q86YN1 238 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 TBX15Q96SF7 602 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 ATG101Q9BSB4 218 aa11.42□□□□□ -0.58
GAPVD1-205ENST00000394084 FCN1O00602 326 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 OR7C2O60412 319 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 RAB4BP61018 213 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 SLC35B1P78383 322 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 CENPWQ5EE01 88 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 OR8I2Q8N0Y5 310 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 GCM1Q9NP62 436 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 SRRM4A7MD48 611 aaKnown RBP11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 A8MXE2 369 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 SERF1AO75920 110 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 CRISP2P16562 243 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 OR10J1P30954 320 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 FXYD3Q14802 87 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 IGFL2Q6UWQ7 119 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 MMD2Q8IY49 270 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 RNF7Q9UBF6 113 aa11.41□□□□□ -0.58
GAPVD1-205ENST00000394084 SNURFLB1AK76 121 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 GLRXP35754 106 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 TCL1AP56279 114 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 PQLC2Q6ZP29 291 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 NEUROG1Q92886 237 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 GNG4P50150 75 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 LINC00310P59036 64 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 TNFAIP6P98066 277 aaPredicted RBP11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 RPEL1Q2QD12 228 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 TOMM20LQ6UXN7 152 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 BAGE3Q86Y29 109 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 BAGE2Q86Y30 109 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 BEND2Q8NDZ0 799 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 RNASE7Q9H1E1 156 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 SLC35D1Q9NTN3 355 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 SLC45A2Q9UMX9 530 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms