RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 OR6V1Q8N148 313 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 KCNRGQ8N5I3 272 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 CDRT4Q8N9R6 151 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 GPR26Q8NDV2 337 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SLC26A10Q8NG04 563 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 OR4D11Q8NGI4 311 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 OR10D4PQ8NGN7 298 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 OR5AR1Q8NGP9 310 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 OR6N1Q8NGY5 312 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ZNRF2Q8NHG8 242 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 GNPDA2Q8TDQ7 276 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ARL11Q969Q4 196 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 APOBEC3DQ96AK3 386 aaPredicted RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 MUCL1Q96DR8 90 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 WDR34Q96EX3 536 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ACY3Q96HD9 319 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF488Q96MN9 340 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 OR4K3Q96R72 315 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 TP53RKQ96S44 253 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 PBDC1Q9BVG4 233 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SUCNR1Q9BXA5 334 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 MAP1LC3CQ9BXW4 147 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SAMD10Q9BYL1 202 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 LINC00470Q9BZP3 86 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SLC25A31Q9H0C2 315 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 MED28Q9H204 178 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 LYRM2Q9NU23 88 aaPredicted RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 UQCC1Q9NVA1 299 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 NDUFB11Q9NX14 153 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 MRPL16Q9NX20 251 aaKnown RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 NAT8Q9UHE5 227 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 VPREB3Q9UKI3 123 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ERG28Q9UKR5 140 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SIGLEC7Q9Y286 467 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 MRPS16Q9Y3D3 137 aaKnown RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 RBM7Q9Y580 266 aaKnown RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 TSC2P49815 1807 aa1.84□□□□□ -2.12
PTPRC-205ENST00000391970 TRBV6-7A0A0A0MS04 114 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 IGHV1-69DA0A0B4J2H0 117 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 A0A0D9SG52 128 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ANKRD20A5PA0PJZ0 165 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 LRCOL1A6NCL2 159 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF878C9JN71 531 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 H7BYZ3 331 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 M0QXV9 152 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 AZIN1O14977 448 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 XRCC2O43543 280 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 GSTZ1O43708 216 aaPredicted RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 MPZL2O60487 215 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 FOXH1O75593 365 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 RAB36O95755 333 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 NRASP01111 189 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 HLA-DRB1P01911 266 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 PMP2P02689 132 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ORM1P02763 201 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ISG15P05161 165 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TACSTD2P09758 323 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 LINC00869P0C866 280 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 RD3LP0DJH9 198 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 SLC25A4P12235 298 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CELP19835 753 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 HIST1H1TP22492 207 aaPredicted RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 HTR1DP28221 377 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 AGTR1P30556 359 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 PPICP45877 212 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 PRLHRP49683 370 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 GNG4P50150 75 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 NUDT2P50583 147 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 GFERP55789 205 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ARPP19P56211 112 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 PIGPP57054 158 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 MLF1P58340 268 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CKS1BP61024 79 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 RPL23P62829 140 aaKnown RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CDK5Q00535 292 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR2F1Q13607 317 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 MAD2L1BPQ15013 274 aaPredicted RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 PDGFRLQ15198 375 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR1Q1Q15612 314 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TNXAQ16473 311 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 SNRNP35Q16560 246 aaKnown RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 FAM78BQ5VT40 261 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 MRPL54Q6P161 138 aaKnown RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM91Q6ZNR0 172 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 FA2HQ7L5A8 372 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CALHM3Q86XJ0 350 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 DOLPP1Q86YN1 238 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 LRRC25Q8N386 305 aaPredicted RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM251Q8N6I4 163 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 SLC35G3Q8N808 338 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 INO80EQ8NBZ0 244 aaPredicted RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 TSTD1Q8NFU3 115 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR8G5Q8NG78 346 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR4B1Q8NGF8 309 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR51A2Q8NGJ7 313 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR2T35Q8NGX2 323 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 OR10G6Q8NH81 332 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 HAVCR2Q8TDQ0 301 aa1.83□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF418Q8TF45 676 aaPredicted RBP1.83□□□□□ -2.12
PTPRC-205ENST00000391970 CANT1Q8WVQ1 401 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms