RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 RUNX1Q01196 453 aa0.74□□□□□ -2.29
RNU6-1000P-201ENST00000391066 CDK10Q15131 360 aa0.74□□□□□ -2.29
RNU6-1000P-201ENST00000391066 UPF3BQ9BZI7 483 aaKnown RBP0.74□□□□□ -2.29
RNU6-1000P-201ENST00000391066 MAP1LC3AQ9H492 121 aa0.74□□□□□ -2.29
RNU6-1000P-201ENST00000391066 LAMB4A4D0S4 1761 aa0.74□□□□□ -2.29
RNU6-1000P-201ENST00000391066 C1orf232A0A0U1RR37 186 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 C21orf140B9A014 251 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 FAM228BP0C875 321 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 SKP1P63208 163 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 RPL18Q07020 188 aaKnown RBP0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 ZNF846Q147U1 533 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 ZNF550Q7Z398 422 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 COMMD7Q86VX2 200 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 OR4C6Q8NH72 309 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 AQP3Q92482 292 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 ATP6V1G3Q96LB4 118 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 MRPL57Q9BQC6 102 aaKnown RBP0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 OR5AC2Q9NZP5 309 aa0.73□□□□□ -2.29
RNU6-1000P-201ENST00000391066 TRAV14DV4A0A0A6YYC5 116 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 SHBGP04278 402 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 RPL12P30050 165 aaKnown RBP0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 MAP2K4P45985 399 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 ZNF80P51504 273 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 RSU1Q15404 277 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 BATFQ16520 125 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 SYPL2Q5VXT5 272 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 CMTM5Q96DZ9 223 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 IL36BQ9NZH7 164 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 COL4A5P29400 1685 aa0.72□□□□□ -2.29
RNU6-1000P-201ENST00000391066 HEATR5AQ86XA9 2040 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 PFDN6O15212 129 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 YEATS4O95619 227 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 C8orf88P0DMB2 117 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 KCNE1P15382 129 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 CD151P48509 253 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 EIF2B2P49770 351 aaKnown RBP0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 MAP3K7CLP57077 242 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 CAV1Q03135 178 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 MED21Q13503 144 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 C11orf40Q8WZ69 217 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 DIRAS2Q96HU8 199 aa0.71□□□□□ -2.3
RNU6-1000P-201ENST00000391066 ABCC11Q96J66 1382 aa0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 MAST2Q6P0Q8 1798 aa0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 TTC21AQ8NDW8 1320 aa0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 M0QX08 132 aa0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 RPS4Y1P22090 263 aaKnown RBP0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 UBE2IP63279 158 aaKnown RBP0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 MLLT11Q13015 90 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 C10orf67Q8IYJ2 551 aa0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 DEFB125Q8N687 156 aa0.7□□□□□ -2.3
RNU6-1000P-201ENST00000391066 TNRC6BQ9UPQ9 1833 aaKnown RBP0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 FABP5P3A8MUU1 101 aa0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 DMTNQ08495 405 aa0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 IBA57Q5T440 356 aaKnown RBP0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 C1orf195Q5TG92 126 aa0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 GLT8D1Q68CQ7 371 aa0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 AAED1Q7RTV5 226 aa0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 EFCAB1Q9HAE3 211 aa0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 ALPK2Q86TB3 2170 aa0.69□□□□□ -2.3
RNU6-1000P-201ENST00000391066 A0A087WX48 190 aa0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 FUOMA2VDF0 154 aa0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 C19orf84I3L1E1 186 aa0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 COX5BP10606 129 aa0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 GPR32P1Q8NGA4 272 aa0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 HDHD2Q9H0R4 259 aa0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 C3orf18Q9UK00 162 aa0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 NCOA6Q14686 2063 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1000P-201ENST00000391066 EXPH5Q8NEV8 1989 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 DCCP43146 1447 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 LOC110117498A0A087WWA1 95 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 CXCR6O00574 342 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 PRM2P04554 102 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 MYL12AP19105 171 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 MARCKSL1P49006 195 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 CCL20P78556 96 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 TMED1Q13445 227 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 KISS1Q15726 138 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 FAM9CQ8IZT9 166 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 WFDC11Q8NEX6 87 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 CNBD2Q96M20 576 aa0.67□□□□□ -2.3
RNU6-1000P-201ENST00000391066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 TRBV6-7A0A0A0MS04 114 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 EVPLLA8MZ36 301 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 BLVRAP53004 296 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 STX5Q13190 355 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 LCN15Q6UWW0 184 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 LRRN1Q6UXK5 716 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 ZNF826PQ6ZT77 177 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 MED12LQ86YW9 2145 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 TMEM156Q8N614 296 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 RASSF5Q8WWW0 418 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 TMEM106AQ96A25 262 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 OBSCN-AS1Q96MR7 158 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 CISHQ9NSE2 258 aa0.66□□□□□ -2.3
RNU6-1000P-201ENST00000391066 RALGAPA2Q2PPJ7 1873 aa0.65□□□□□ -2.3
RNU6-1000P-201ENST00000391066 A0A0J9YY10 115 aa0.65□□□□□ -2.31
RNU6-1000P-201ENST00000391066 A0A1B0GX78 115 aa0.65□□□□□ -2.31
RNU6-1000P-201ENST00000391066 OR5F1O95221 314 aa0.65□□□□□ -2.31
RNU6-1000P-201ENST00000391066 APOEP02649 317 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms