RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 RBM38Q9H0Z9 239 aaKnown RBP8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 TMEM14BQ9NUH8 114 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 FBXL7Q9UJT9 491 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 DPPA5A6NC42 116 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 DBX1A6NMT0 343 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 GSTZ1O43708 216 aaPredicted RBP8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 RAB3DO95716 219 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 DHFRP00374 187 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 REG1AP05451 166 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 SERPINE2P07093 398 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 P0C879 139 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 TRAPPC2P0DI81 140 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 TRAPPC2BP0DI82 140 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 S100GP29377 79 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 TNFSF8P32971 234 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 RPEL1Q2QD12 228 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 ADAMTSL5Q6ZMM2 481 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 HSD17B13Q7Z5P4 300 aaPredicted RBP8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 DIRAS2Q96HU8 199 aa8.67□□□□□ -1.02
IGHV4-28-201ENST00000390612 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 H0Y980 276 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 GP9P14770 177 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 PI3P19957 117 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 MFAP2P55001 183 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 PIGPP57054 158 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 GPHB5Q86YW7 130 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 Q8N1Y9 231 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 GDPD1Q8N9F7 314 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR5B3Q8NH48 314 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 TP53RKQ96S44 253 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 TSC22D3Q99576 134 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 THAP7Q9BT49 309 aaPredicted RBP8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 FKBP11Q9NYL4 201 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 PRNDQ9UKY0 176 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 NSG2Q9Y328 171 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR51B2Q9Y5P1 312 aa8.66□□□□□ -1.02
IGHV4-28-201ENST00000390612 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 ANKRD20A5PA0PJZ0 165 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 MFSD2BA6NFX1 497 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 PPP5D1E7EU14 171 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 LGALS9O00182 355 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 GGCTO75223 188 aaKnown RBP8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 SNAPC5O75971 98 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 IGKV1-5P01602 117 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 CTSDP07339 412 aaPredicted RBP8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR13C7P0DN81 318 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 PGAM2P15259 253 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 IL18Q14116 193 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 MEF2DQ14814 521 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 TATDN3Q17R31 274 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR4C16Q8NGL9 310 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR13C8Q8NGS7 320 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 MCFD2Q8NI22 146 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 ZNF502Q8TBZ5 544 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 ZFAND1Q8TCF1 268 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 EEF1AKMT3Q96AZ1 226 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 CXorf58Q96LI9 332 aa8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 RTBDNQ9BSG5 229 aaPredicted RBP8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 C6orf62Q9GZU0 229 aaPredicted RBP8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 RSL24D1Q9UHA3 163 aaKnown RBP8.65□□□□□ -1.02
IGHV4-28-201ENST00000390612 ZNF701M0R085 212 aaPredicted RBP8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 NOL3O60936 208 aaKnown RBP8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 OR2C1O95371 312 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 HLA-AP01891 365 aaKnown RBP8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 NHLRC4P0CG21 123 aaPredicted RBP8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 AKAIN1P0CW23 69 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 DEFA4P12838 97 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 UCP1P25874 307 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 PPP5CP53041 499 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 CD69Q07108 199 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 C11orf87Q6NUJ2 197 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 FAAP20Q6NZ36 180 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 VN1R17PQ8TDU5 208 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 LSM10Q969L4 123 aaKnown RBP8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 ATP6V0BQ99437 205 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 SLC2A8Q9NY64 477 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 GPR132Q9UNW8 380 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 F11RQ9Y624 299 aaKnown RBP8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 SMAD5-AS1Q9Y6J3 95 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 S4R3C0 116 aa8.64□□□□□ -1.03
IGHV4-28-201ENST00000390612 A0A0B4J293 547 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 C3orf85A0A1B0GTC6 90 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 FABP12A6NFH5 140 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 A8MZ25 164 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 F8W735 103 aaPredicted RBP8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 B3GALNT1O75752 331 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 LY86O95711 162 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 CLEC3BP05452 202 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 ARL3P36405 182 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 HSPE1P61604 102 aaKnown RBP8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 H2BFWTQ7Z2G1 175 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 CCDC71LQ8N9Z2 235 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 TMEM56Q96MV1 263 aa8.63□□□□□ -1.03
IGHV4-28-201ENST00000390612 C5orf66Q9H5L9 145 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms