RNA–Protein interactions for RNA: ENST00000390490.1

TRAJ47-201, Transcript of T cell receptor alpha joining 47, humanhuman

APPRIS P1 BASIC

Gene TRAJ47, Length 57 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ47-201ENST00000390490 PPIBP23284 216 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 MSNP26038 577 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 PSMB8P28062 276 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 HLA-DMBP28068 263 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ERP29P30040 261 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ALDH3A1P30838 453 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 CCR2P41597 374 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 RPL28P46779 137 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 GABRA4P48169 554 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 EMP1P54849 157 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TPI1P60174 286 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 MEF2BQ02080 365 aaPredicted RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 RPL18Q07020 188 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TAF9Q16594 264 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ARHGAP11BQ3KRB8 267 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 PABPC1L2AQ5JQF8 200 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 IBA57Q5T440 356 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 C9orf64Q5T6V5 341 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 AADACL3Q5VUY0 350 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 RPL22L1Q6P5R6 122 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 AGTRAPQ6RW13 159 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF705AQ6ZN79 300 aaPredicted RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 GOLT1AQ6ZVE7 132 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF767PQ75MW2 155 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TCF24Q7RTU0 167 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 SLC35E3Q7Z769 313 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 LYG2Q86SG7 212 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 LHFPL1Q86WI0 220 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 OR11H6Q8NGC7 330 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 OR51T1Q8NGJ9 327 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 OR13C4Q8NGS5 318 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 OR5J2Q8NH18 312 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 NEK7Q8TDX7 302 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 H1FXQ92522 213 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TOMM6Q96B49 74 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 MRPS24Q96EL2 167 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 C20orf166-AS1Q96NR2 134 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 IMMP2LQ96T52 175 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 HOPXQ9BPY8 73 aaPredicted RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 DERL1Q9BUN8 251 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF471Q9BX82 626 aaPredicted RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 OR8D2Q9GZM6 311 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 C20orf27Q9GZN8 174 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 VCX3BQ9H321 246 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 NAT8Q9UHE5 227 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 PSORS1C2Q9UIG4 136 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 RBM7Q9Y580 266 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TIMM9Q9Y5J7 89 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 FAM215AQ9Y5M1 114 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 V9GYQ6 96 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 DSCAML1Q8TD84 2053 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 NACADO15069 1562 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 HECW2Q9P2P5 1572 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 REREQ9P2R6 1566 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TRPM3Q9HCF6 1732 aaPredicted RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 KMT2EQ8IZD2 1858 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 CAMSAP1Q5T5Y3 1602 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 DICER1Q9UPY3 1922 aaKnown RBP0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 TRAV7A0A075B6U4 112 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 IGKV1D-43A0A0B4J1Z2 117 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 TRAV38-1A0A0B4J264 116 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 TRAV41A0A0B4J266 112 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 MUC21A0A0G2JKD1 596 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 MUC21A0A140T8X8 626 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 TRAPPC13A5PLN9 417 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 SDHAF1A6NFY7 115 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 FNDC10F2Z333 226 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 PGRMC1O00264 195 aaKnown RBP0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 SLC22A1O15245 554 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 HMGB3O15347 200 aaKnown RBP0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF73O43830 326 aaPredicted RBP0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 S1PR2O95136 353 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 IFNA1P01562 189 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 IGHV3-7P01780 117 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 PPBPP02775 128 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 IGKV4-1P06312 121 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 OR4E1P0C645 316 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 SULT1A3P0DMM9 295 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 SULT1A4P0DMN0 295 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 CBR1P16152 277 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 HINT1P49773 126 aaPredicted RBP0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 DEFA3P59666 94 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 RAB14P61106 215 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 HSPE1P61604 102 aaKnown RBP0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 B2MP61769 119 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF90Q03938 601 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 FOXF1Q12946 379 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 MOGQ16653 247 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 SPANXN3Q5MJ09 141 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 TRIQKQ629K1 86 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 KRTAP5-11Q6L8G4 156 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 HCP5Q6MZN7 132 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 Q6Q795 121 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 LYZL1Q6UWQ5 148 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 DYNAPQ8N1N2 210 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 C12orf45Q8N5I9 185 aaPredicted RBP0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 OR13C6PQ8NH95 151 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 SLC25A40Q8TBP6 338 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 FAM172AQ8WUF8 416 aa0.68□□□□□ -2.3
TRAJ47-201ENST00000390490 RASSF5Q8WWW0 418 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms