RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CFHR5Q9BXR6 569 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 TMEM191AQ9H0A3 160 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 LSM4Q9Y4Z0 139 aaKnown RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 SIAH2O43255 324 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 PPIFP30405 207 aaKnown RBP4.21□□□□□ -1.74
LTN1-202ENST00000389194 CKS2P33552 79 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 UNQ5815/PRO19632Q6UWF5 114 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 LINC00305Q7Z4B0 112 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 GLRX5Q86SX6 157 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 MMD2Q8IY49 270 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 STXBP6Q8NFX7 210 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 SFRP2Q96HF1 295 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 NPCDR1Q9BY65 106 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 GSN-AS1Q9NRJ2 163 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 CBY1Q9Y3M2 126 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 PCNX3Q9H6A9 2034 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 DLX1P56177 255 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 C2orf83Q53S99 150 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 ARTNQ5T4W7 220 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 OR4A5Q8NH83 315 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 DDA1Q9BW61 102 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 PRDM14Q9GZV8 571 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 DNAJC4Q9NNZ3 241 aa4.21□□□□□ -1.74
LTN1-202ENST00000389194 ANAPC1Q9H1A4 1944 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 PPIAL4CA0A0B4J2A2 164 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 FOXI3A8MTJ6 420 aaPredicted RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 IL4P05112 153 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 PPIAL4GP0DN37 164 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 HSPE1P61604 102 aaKnown RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 C1QL4Q86Z23 238 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 OR10W1Q8NGF6 305 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 GLMPQ8WWB7 406 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 WBP1Q96G27 269 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 C16orf92Q96LL3 132 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 HS3ST6Q96QI5 342 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 ZNRD1Q9P1U0 126 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 C7orf71A4D174 169 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 ISLRO14498 428 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 LY6HO94772 140 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 IGHMP01871 453 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 RIGQ13278 110 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 ICAM4Q14773 271 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 C10orf55Q5SWW7 151 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 PCSK4Q6UW60 755 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 MRPL13Q9BYD1 178 aaKnown RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 HEXA-AS1Q9H8Q6 139 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 IDI2-AS1Q9NZ38 188 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 DENND4CQ5VZ89 1909 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 C9orf172C9J069 976 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 IL6RP08887 468 aaPredicted RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 SRP19P09132 144 aaKnown RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 FXYD7P58549 80 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 ACP7Q6ZNF0 438 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 BPIFA4PQ86YQ2 179 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 OIT3Q8WWZ8 545 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 IMMP1LQ96LU5 166 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 METRNQ9UJH8 293 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 TMEM189A5PLL7 270 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 PYYP10082 97 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 GCHFRP30047 84 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 BSPH1Q075Z2 132 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 C10orf128Q5T292 105 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 ZNF738Q8NE65 137 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 FOXA2Q9Y261 457 aaPredicted RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 PRRC2CQ9Y520 2896 aaKnown RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 ABCA2Q9BZC7 2435 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 LOC107984156A0A0G2JMH3 177 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 CDX1P47902 265 aaPredicted RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 RIPPLY2Q5TAB7 128 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 ARL17AQ8IVW1 177 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 OR51M1Q9H341 326 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 OTOGLQ3ZCN5 2332 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 TRAV24A0A0B4J272 114 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 CA11O75493 328 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 KBTBD11O94819 623 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 NAPSAO96009 420 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 SRD5A1P18405 259 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 SUPT4H1P63272 117 aaKnown RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 PAFAH1B2P68402 229 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 RBPMS2Q6ZRY4 209 aaKnown RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 ABHD17AQ96GS6 310 aa4.2□□□□□ -1.74
LTN1-202ENST00000389194 MRPL20Q9BYC9 149 aaKnown RBP4.2□□□□□ -1.74
LTN1-202ENST00000389194 C2CD3Q4AC94 2353 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.19□□□□□ -1.74
LTN1-202ENST00000389194 LEPROTL1O95214 131 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 IGHV3-11P01762 117 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 CDKN1AP38936 164 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 C11orf44Q8N8P7 122 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 ZBTB34Q8NCN2 500 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 DERL1Q9BUN8 251 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 TRAV5A0A0B4J249 113 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 CD99P14209 185 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 MCRIP2Q9BUT9 160 aaKnown RBP4.19□□□□□ -1.74
LTN1-202ENST00000389194 BEX4Q9NWD9 120 aaPredicted RBP4.19□□□□□ -1.74
LTN1-202ENST00000389194 SPRR3Q9UBC9 169 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 NCOA6Q14686 2063 aaPredicted RBP4.19□□□□□ -1.74
LTN1-202ENST00000389194 C8orf88P0DMB2 117 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 GZMBP10144 247 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 MAS1LP35410 378 aa4.19□□□□□ -1.74
LTN1-202ENST00000389194 FAM162BQ5T6X4 162 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms