RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 U3KQ87 197 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 NDUFA3O95167 84 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 RPL7L1Q6DKI1 246 aaKnown RBP21.41■■□□□ 1.02
MSX1-201ENST00000382723 OR8G2PQ6IF36 304 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 TMEM14EPQ6UXP3 125 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 MEGF9Q9H1U4 602 aa21.41■■□□□ 1.02
MSX1-201ENST00000382723 TET2Q6N021 2002 aaPredicted RBP21.4■■□□□ 1.02
MSX1-201ENST00000382723 CREBBPQ92793 2442 aa21.4■■□□□ 1.02
MSX1-201ENST00000382723 FBP1P09467 338 aa21.39■■□□□ 1.02
MSX1-201ENST00000382723 ARL16Q0P5N6 197 aa21.39■■□□□ 1.02
MSX1-201ENST00000382723 ST8SIA2Q92186 375 aa21.39■■□□□ 1.02
MSX1-201ENST00000382723 CGB1A6NKQ9 187 aa21.39■■□□□ 1.01
MSX1-201ENST00000382723 LY86O95711 162 aa21.39■■□□□ 1.01
MSX1-201ENST00000382723 C5orf64Q2M2E5 130 aa21.39■■□□□ 1.01
MSX1-201ENST00000382723 HAPLN4Q86UW8 402 aa21.39■■□□□ 1.01
MSX1-201ENST00000382723 OR1S2Q8NGQ3 325 aa21.39■■□□□ 1.01
MSX1-201ENST00000382723 NANPQ8TBE9 248 aa21.39■■□□□ 1.01
MSX1-201ENST00000382723 C22orf15Q8WYQ4 148 aa21.39■■□□□ 1.01
MSX1-201ENST00000382723 ZNF469Q96JG9 3925 aaPredicted RBP21.38■■□□□ 1.01
MSX1-201ENST00000382723 C15orf62A8K5M9 175 aa21.38■■□□□ 1.01
MSX1-201ENST00000382723 CA2P00918 260 aa21.38■■□□□ 1.01
MSX1-201ENST00000382723 UBA52P62987 128 aaKnown RBP21.38■■□□□ 1.01
MSX1-201ENST00000382723 SSX3Q99909 188 aa21.38■■□□□ 1.01
MSX1-201ENST00000382723 AKAP9Q99996 3911 aa21.38■■□□□ 1.01
MSX1-201ENST00000382723 A0A1B0GW64 132 aa21.37■■□□□ 1.01
MSX1-201ENST00000382723 MAS1LP35410 378 aa21.37■■□□□ 1.01
MSX1-201ENST00000382723 RPL27AP46776 148 aaKnown RBP21.37■■□□□ 1.01
MSX1-201ENST00000382723 COMPP49747 757 aaPredicted RBP21.37■■□□□ 1.01
MSX1-201ENST00000382723 RPP30P78346 268 aaKnown RBP21.37■■□□□ 1.01
MSX1-201ENST00000382723 BCL6BQ8N143 479 aaPredicted RBP21.37■■□□□ 1.01
MSX1-201ENST00000382723 ZNF680Q8NEM1 530 aa21.37■■□□□ 1.01
MSX1-201ENST00000382723 FAM210AQ96ND0 272 aa21.37■■□□□ 1.01
MSX1-201ENST00000382723 MDFIC2A0A1B0GVS7 189 aa21.36■■□□□ 1.01
MSX1-201ENST00000382723 CNIH1O95406 144 aa21.36■■□□□ 1.01
MSX1-201ENST00000382723 OR8U8P0C7N1 319 aa21.36■■□□□ 1.01
MSX1-201ENST00000382723 EXOSC2Q13868 293 aaKnown RBP21.36■■□□□ 1.01
MSX1-201ENST00000382723 SLC24A4Q8NFF2 622 aa21.36■■□□□ 1.01
MSX1-201ENST00000382723 PIFOQ8TCI5 191 aa21.36■■□□□ 1.01
MSX1-201ENST00000382723 APELAP0DMC3 54 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 TPT1P13693 172 aaKnown RBP21.35■■□□□ 1.01
MSX1-201ENST00000382723 HBG1P69891 147 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 HBG2P69892 147 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 SSBP2P81877 361 aaPredicted RBP21.35■■□□□ 1.01
MSX1-201ENST00000382723 ALKAL2Q6UX46 152 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 TMEM219Q86XT9 240 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 C1RLQ9NZP8 487 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 TNCP24821 2201 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 A0A1W2PN81 502 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 FSHBP01225 129 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 CHRNA7P36544 502 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 BPIFB3P59826 476 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 LRRC75BQ2VPJ9 315 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 LILRB2Q8N423 598 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 TMEM170AQ8WVE7 144 aa21.35■■□□□ 1.01
MSX1-201ENST00000382723 JTBO76095 146 aa21.34■■□□□ 1.01
MSX1-201ENST00000382723 NPY1RP25929 384 aa21.34■■□□□ 1.01
MSX1-201ENST00000382723 WT1-ASQ06250 92 aa21.34■■□□□ 1.01
MSX1-201ENST00000382723 SLC38A11Q08AI6 406 aa21.34■■□□□ 1.01
MSX1-201ENST00000382723 STOML3Q8TAV4 291 aa21.34■■□□□ 1.01
MSX1-201ENST00000382723 BORCS7-ASMTA0A0B4J1R7 106 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 PMS2P5A8MQ11 134 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 IFNA7P01567 189 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 OR13C7P0DN81 318 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 SNCAP37840 140 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 ERHP84090 104 aaKnown RBP21.33■■□□□ 1.01
MSX1-201ENST00000382723 DEFB112Q30KQ8 113 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 BAP18Q8IXM2 172 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 SLC7A5P1Q8MH63 180 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 Q8N9W7 124 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 OR10P1Q8NGE3 313 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 SRSF12Q8WXF0 261 aaKnown RBP21.33■■□□□ 1.01
MSX1-201ENST00000382723 ATP5SQ99766 215 aa21.33■■□□□ 1.01
MSX1-201ENST00000382723 H3BUX3 64 aa21.33■■□□□ 1
MSX1-201ENST00000382723 REG1AP05451 166 aa21.33■■□□□ 1
MSX1-201ENST00000382723 RAB11AP62491 216 aa21.33■■□□□ 1
MSX1-201ENST00000382723 ETV3LQ6ZN32 361 aa21.33■■□□□ 1
MSX1-201ENST00000382723 ABCA1O95477 2261 aa21.32■■□□□ 1
MSX1-201ENST00000382723 IFNA4P05014 189 aa21.32■■□□□ 1
MSX1-201ENST00000382723 HTR2BP41595 481 aa21.32■■□□□ 1
MSX1-201ENST00000382723 LY6EQ16553 131 aa21.32■■□□□ 1
MSX1-201ENST00000382723 ZNF767PQ75MW2 155 aa21.32■■□□□ 1
MSX1-201ENST00000382723 STPG2Q8N412 459 aa21.32■■□□□ 1
MSX1-201ENST00000382723 FXYD3Q14802 87 aa21.31■■□□□ 1
MSX1-201ENST00000382723 RASL11BQ9BPW5 248 aa21.31■■□□□ 1
MSX1-201ENST00000382723 SLC25A33Q9BSK2 321 aa21.31■■□□□ 1
MSX1-201ENST00000382723 EIF5AP63241 154 aaKnown RBP21.31■■□□□ 1
MSX1-201ENST00000382723 ZNF266Q14584 549 aa21.31■■□□□ 1
MSX1-201ENST00000382723 UBAC2Q8NBM4 344 aa21.31■■□□□ 1
MSX1-201ENST00000382723 SSMEM1Q8WWF3 244 aa21.31■■□□□ 1
MSX1-201ENST00000382723 UBQLN2Q9UHD9 624 aa21.31■■□□□ 1
MSX1-201ENST00000382723 TEX15Q9BXT5 2789 aa21.31■■□□□ 1
MSX1-201ENST00000382723 IGLC7A0M8Q6 106 aa21.3■■□□□ 1
MSX1-201ENST00000382723 TEX22C9J3V5 150 aa21.3■■□□□ 1
MSX1-201ENST00000382723 DFFBO76075 338 aa21.3■■□□□ 1
MSX1-201ENST00000382723 HSD17B11Q8NBQ5 300 aa21.3■■□□□ 1
MSX1-201ENST00000382723 FLNAP21333 2647 aaKnown RBP21.3■■□□□ 1
MSX1-201ENST00000382723 INS-IGF2F8WCM5 200 aa21.29■■□□□ 1
MSX1-201ENST00000382723 RNASE2P10153 161 aaKnown RBP21.29■■□□□ 1
MSX1-201ENST00000382723 AREGP15514 252 aa21.29■■□□□ 1
MSX1-201ENST00000382723 CX3CL1P78423 397 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms