RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, human

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-204	ENST00000382004	PPP1R27	Q86WC6	154 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	MRAP	Q8TCY5	172 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	KLF14	Q8TD94	323 aa	Predicted RBP	4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	CHCHD5	Q9BSY4	110 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	JPT1	Q9UK76	154 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	TIAM2	Q8IVF5	1701 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004		A0A0G2JLM5	398 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004		A8MWV9	139 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	SMIM8	Q96KF7	97 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	PSCA	O43653	123 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	PAX1	P15863	534 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	SRD5A1	P18405	259 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	PRTN3	P24158	256 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	LINC00518	Q8N0U6	118 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	FMC1	Q96HJ9	113 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	NPCDR1	Q9BY65	106 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	SEPSECS	Q9HD40	501 aa	Known RBP	4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	GPR132	Q9UNW8	380 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	C5	P01031	1676 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	PEX11B	O96011	259 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	IGFBP2	P18065	325 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	OCIAD2	Q56VL3	154 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	ZFAND6	Q6FIF0	208 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	G6PC2	Q9NQR9	355 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	CRYBG1	Q9Y4K1	1723 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	PTP4A3	O75365	173 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	LGALS1	P09382	135 aa	Known RBP	4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	DEFB104A	Q8WTQ1	72 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	RPRM	Q9NS64	109 aa		4.99	□□□□□ -1.61
RFX3-204	ENST00000382004	DANCR	P0C864	163 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	ZNRF1	Q8ND25	227 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	HIGD1C	A8MV81	97 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	VWC2L	B2RUY7	222 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004		F8WEM9	126 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	DPM2	O94777	84 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	CRYBA2	P53672	197 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	TFF3	Q07654	80 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	NSUN5P1	Q3KNT7	163 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	DRAM1	Q8N682	238 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	TMEM167A	Q8TBQ9	72 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	WDYHV1	Q96HA8	205 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	RBM38	Q9H0Z9	239 aa	Known RBP	4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	PEMT	Q9UBM1	199 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	CENPVL1	A0A0U1RR11	272 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	ZNF729	A6NN14	1252 aa	Predicted RBP	4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	PAX4	O43316	350 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	IGKV1D-16	P01601	117 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	MYO16	Q9Y6X6	1858 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	PPIF	P30405	207 aa	Known RBP	4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	DTX2	Q86UW9	622 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	C11orf44	Q8N8P7	122 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	HMGCLL1	Q8TB92	370 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	ARPC1A	Q92747	370 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004		Q9H3A6	140 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	TRAV8-1	A0A0A6YYK1	113 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	TNFRSF6B	O95407	300 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	PTGDS	P41222	190 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	ZP4	Q12836	540 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	GAGE2B	Q13066	116 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	FBLN7	Q53RD9	439 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	STPG1	Q5TH74	334 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	GATAD1	Q8WUU5	269 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	IGHV1-45	A0A0A0MS14	117 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	PRB4	P10163	310 aa	Predicted RBP	4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	PRB3	Q04118	309 aa	Predicted RBP	4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	EGR4	Q05215	589 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	TIMM23B	Q5SRD1	257 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	GTSCR1	Q86UQ5	136 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	SFXN3	Q9BWM7	321 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	SELENOK	Q9Y6D0	94 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	TMEM52	Q8NDY8	209 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	C5orf66	Q9H5L9	145 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	C21orf62	Q9NYP8	219 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	ERG28	Q9UKR5	140 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	KIAA1217	Q5T5P2	1943 aa		4.98	□□□□□ -1.61
RFX3-204	ENST00000382004	VDAC2	P45880	294 aa	Predicted RBP	4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	ISX	Q2M1V0	245 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	OR52E5	Q8NH55	327 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	KDM3B	Q7LBC6	1761 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	GFRA3	O60609	400 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	HLA-DQB1	P01920	261 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	PKIB	Q9C010	78 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	PRR19	A6NJB7	356 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	AQP3	Q92482	292 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	MCM3AP	O60318	1980 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	ATP5G3	P48201	142 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	GNG5	P63218	68 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	TMEM187	Q14656	261 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	IFI27L2	Q9H2X8	130 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	FST	P19883	344 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	GDF15	Q99988	308 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	IZUMO1R	A6ND01	250 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	LOXL4	Q96JB6	756 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	CITED1	Q99966	193 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	ANAPC10	Q9UM13	185 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	CXorf51A	A0A1B0GTR3	108 aa		4.97	□□□□□ -1.61
RFX3-204	ENST00000382004	ITGB1BP1	O14713	200 aa		4.97	□□□□□ -1.61

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