RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 OR4C13Q8NGP0 309 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 ZNF418Q8TF45 676 aaPredicted RBP11.85□□□□□ -0.51
SNPH-201ENST00000381867 PRELID3AQ96N28 172 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 KLF4O43474 513 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 TBR1Q16650 682 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 CLDN16Q9Y5I7 305 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 HAX1O00165 279 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 ST6GALNAC6Q969X2 333 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 LAMTOR2Q9Y2Q5 125 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 APOHP02749 345 aaPredicted RBP11.85□□□□□ -0.51
SNPH-201ENST00000381867 PF4V1P10720 104 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 TCF23Q7RTU1 214 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
SNPH-201ENST00000381867 hCG_38984A0A1B0GV85 526 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 RAMP1O60894 148 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 LINC00305Q7Z4B0 112 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 LRTM2Q8N967 370 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 TMEM54Q969K7 222 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 VCX2Q9H322 139 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
SNPH-201ENST00000381867 IGKV3D-15A0A087WSY6 115 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 FADS6Q8N9I5 356 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 SAMD13Q5VXD3 122 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 FDCSPQ8NFU4 85 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 DDB2Q92466 427 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 LDLRAD4O15165 306 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 NDUFA2O43678 99 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 ATP5LO75964 103 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 PPP1R17O96001 155 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 REG1AP05451 166 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 GPX1P07203 203 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 C1orf162Q8NEQ5 155 aaPredicted RBP11.84□□□□□ -0.51
SNPH-201ENST00000381867 TMEM170AQ8WVE7 144 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 TMEM186Q96B77 213 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 RTBDNQ9BSG5 229 aaPredicted RBP11.84□□□□□ -0.51
SNPH-201ENST00000381867 SEMA5BQ9P283 1151 aa11.84□□□□□ -0.51
SNPH-201ENST00000381867 MTCL1Q9Y4B5 1905 aaKnown RBP11.84□□□□□ -0.51
SNPH-201ENST00000381867 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 ZNF324BQ6AW86 544 aaPredicted RBP11.83□□□□□ -0.52
SNPH-201ENST00000381867 PIKFYVEQ9Y2I7 2098 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 UCP1P25874 307 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 CHD5Q8TDI0 1954 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 IGLV3-32A0A0A0MS00 114 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 CGAP01215 116 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 RRN3P1Q2M238 152 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 TFF3Q07654 80 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 OR9G1Q8NH87 305 aa11.83□□□□□ -0.52
SNPH-201ENST00000381867 SNAI2O43623 268 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 ZNF56Q15929 161 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 JKAMPQ9P055 326 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 WDR81Q562E7 1941 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 A0A1B0GW15 77 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 PEX7O00628 323 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
SNPH-201ENST00000381867 CA1P00915 261 aaPredicted RBP11.82□□□□□ -0.52
SNPH-201ENST00000381867 CCL19Q99731 98 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 UBE2CO00762 179 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 MOSP00540 346 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 UMODP07911 640 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 EGR4Q05215 589 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 KLF14Q8TD94 323 aaPredicted RBP11.82□□□□□ -0.52
SNPH-201ENST00000381867 OR5P3Q8WZ94 311 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 IZUMO1RA6ND01 250 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 TIMP4Q99727 224 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 AICDAQ9GZX7 198 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 SEC16AO15027 2179 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 A0A1B0GTI1 187 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 A0A1B0GUT8 65 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 ATP5G3P48201 142 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 DNM1P46Q6ZS02 220 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
SNPH-201ENST00000381867 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
SNPH-201ENST00000381867 SERF1AO75920 110 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
SNPH-201ENST00000381867 BTCP35070 178 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 IFI27L2Q9H2X8 130 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 NRN1Q9NPD7 142 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 TSPOP30536 169 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 Q6ZT83 130 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 SRXN1Q9BYN0 137 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 FOXI3A8MTJ6 420 aaPredicted RBP11.81□□□□□ -0.52
SNPH-201ENST00000381867 THY1P04216 161 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 NBEAP1P0C6P0 100 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 PDLIM4P50479 330 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 CRYBA2P53672 197 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 ICAM4Q14773 271 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
SNPH-201ENST00000381867 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
SNPH-201ENST00000381867 FMC1Q96HJ9 113 aa11.8□□□□□ -0.52
SNPH-201ENST00000381867 FOXC2Q99958 501 aa11.8□□□□□ -0.52
SNPH-201ENST00000381867 TDRD6O60522 2096 aaKnown RBP11.8□□□□□ -0.52
SNPH-201ENST00000381867 TSC2P49815 1807 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms