RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 IGLV1-44P01699 117 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 ZNF705DP0CH99 300 aaPredicted RBP13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 ZNF705BP0CI00 300 aaPredicted RBP13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 G0S2P27469 103 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 EFNB3Q15768 340 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 C1orf185Q5T7R7 199 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 MOB3BQ86TA1 216 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 FAM90A1Q86YD7 464 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 GCSAMQ8N6F7 178 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 BEND2Q8NDZ0 799 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 OR10G8Q8NGN5 311 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 HINT2Q9BX68 163 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 TLN1Q9Y490 2541 aaKnown RBP13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 Q6ZWC4 215 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 TCTEX1D1Q8N7M0 179 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 STPG3Q8N7X2 389 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 ADGRG4Q8IZF6 3080 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 MBD3L4A6NDZ8 208 aaPredicted RBP13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 MBD3L3A6NE82 208 aaPredicted RBP13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 MBD3L5A6NJ08 208 aaPredicted RBP13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 CXorf1O96002 111 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 GCHFRP30047 84 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 LOXL3P58215 753 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 NUTF2P61970 127 aaKnown RBP13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 CCL8P80075 99 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 HTD2P86397 168 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 ZNF90Q03938 601 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 ASPHD1Q5U4P2 390 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 MBD3L2Q8NHZ7 208 aaPredicted RBP13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 SNRNP40Q96DI7 357 aaKnown RBP13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 TBX15Q96SF7 602 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 YLPM1P49750 1951 aaKnown RBP13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 ARFGEF3Q5TH69 2177 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 ADH4P08319 380 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 CMTM2Q8TAZ6 248 aa13.36□□□□□ -0.27
NKX3-1-201ENST00000380871 CDKN1AP38936 164 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 ERVK-16P61578 105 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 Q6ZS92 163 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 OR4P4Q8NGL7 312 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 LSM4Q9Y4Z0 139 aaKnown RBP13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 SERF1AO75920 110 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 RPL29P47914 159 aaKnown RBP13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 GNG10P50151 68 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 AARDQ4LEZ3 155 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 KRTCAP3Q53RY4 240 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 S1PR3Q99500 378 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 IGFBP2P18065 325 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 SLC35B1P78383 322 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 CCL13Q99616 98 aa13.35□□□□□ -0.27
NKX3-1-201ENST00000380871 IGF2RP11717 2491 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 MPDU1O75352 247 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 GATA2P23769 480 aaPredicted RBP13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 TMEM249Q2WGJ8 235 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 LBHQ53QV2 105 aaPredicted RBP13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 TOMM20LQ6UXN7 152 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 MIR17HGQ75NE6 70 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 NEU1Q99519 415 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 ZNRD1Q9P1U0 126 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 DSCAMO60469 2012 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 CEACAM4O75871 244 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 IER3P46695 156 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 CASP6P55212 293 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 ERVFC1-1P60608 527 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 PRR30Q53SZ7 412 aaPredicted RBP13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 C1orf194Q5T5A4 169 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 RNF114Q9Y508 228 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 ABCA4P78363 2273 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 COL6A6A6NMZ7 2263 aa13.34□□□□□ -0.27
NKX3-1-201ENST00000380871 TNFAIP6P98066 277 aaPredicted RBP13.33□□□□□ -0.27
NKX3-1-201ENST00000380871 ZNF124Q15973 351 aa13.33□□□□□ -0.27
NKX3-1-201ENST00000380871 TIMM23BQ5SRD1 257 aa13.33□□□□□ -0.27
NKX3-1-201ENST00000380871 MBNL2Q5VZF2 373 aaKnown RBP13.33□□□□□ -0.27
NKX3-1-201ENST00000380871 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.27
NKX3-1-201ENST00000380871 KIR2DL5BA0A0G2JN68 375 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 KIR2DL5BA0A0G2JPC4 375 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 CA2P00918 260 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 SELENOVP59797 346 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 KIR2DL5AQ8N109 375 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 FAM216AQ8WUB2 273 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 YPEL3P61236 119 aaPredicted RBP13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 RPP30P78346 268 aaKnown RBP13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 CYB5R2Q6BCY4 276 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 NPVFQ9HCQ7 196 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 JPT1Q9UK76 154 aa13.33□□□□□ -0.28
NKX3-1-201ENST00000380871 TMPRSS3P57727 454 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 OR4A47Q6IF82 309 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 DOLPP1Q86YN1 238 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 HSPB9Q9BQS6 159 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 ATRXP46100 2492 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 SAA2-SAA4A0A096LPE2 208 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 SRRM5B3KS81 715 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 CRYABP02511 175 aaKnown RBP13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 SAA2P0DJI9 122 aaPredicted RBP13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 NPY1RP25929 384 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 TEPPQ6URK8 271 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 FAM216BQ8N7L0 139 aa13.32□□□□□ -0.28
NKX3-1-201ENST00000380871 SLC24A4Q8NFF2 622 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms